Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 129 6e-25 seq2 122 9e-23 seq1 107 2e-18 >seq3 Length=5104443 Score = 129 bits (142), Expect = 6e-25 Identities = 372/563 (66%), Gaps = 16/563 (3%) Strand=Plus/Plus Query 132584 TGGCAAACATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTT 132643 || || |||| || ||| || ||||| || ||||| ||||| || || || || | Sbjct 4691381 TGCCAGACATGACACCAGCCTTCTGATAGTCACCCACTCGCTTCTCGAAGAAGTTGGTCT 4691440 Query 132644 TTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGT---GCT 132700 | || | | ||| ||| | ||| || |||||||| | || ||||||| ||| Sbjct 4691441 TGCCAGCAAGGGAGATGTTCTCCATGAAGCTGAAGGGGTTAGTTGCGTTGTAGACGCGCT 4691500 Query 132701 TGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG- 132759 || | || || | | | |||||| | |||||| ||||||||||| || || ||| Sbjct 4691501 TGTTTCCCAT---GGCCAGGAGCAGACGGTCGGCGACGAACTCGATATACTGTTGCATCA 4691557 Query 132760 GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTC 132818 | || || | | | || || ||| |||| || | | || ||||| | || || ||| Sbjct 4691558 GCTTGGCGTTCATG-CCAAGAAGA-GCACAGGGAAGAGCATCGGTCAAGAATTCTTTCTC 4691615 Query 132819 GATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAA 132878 |||||| || || || |||| ||| | | | || | | ||| || | Sbjct 4691616 GATGGCAACGGCCTCAGTGATGATGGCTTCGATGAGCTTGGGGTCTGGCTTGTGGTTAAG 4691675 Query 132879 ATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTC 132938 |||| | | ||||| ||||||||| |||| ||||||||| | || || | || Sbjct 4691676 GTGCTGAAGTAATAAGCAGGCAAAGTCGGTGTGCATGCCCTCGTCTCGAGAGATCAACTC 4691735 Query 132939 GTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 |||| ||| ||||| || ||||| || || || | ||| || ||||||||||| Sbjct 4691736 GTTGGAGAAGGTCAAACCAGGCATAAGTCCCTTGGCCTTCAACCAGAAGATGGCGGCGAA 4691795 Query 132999 ACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA---A 133055 ||| || ||||||| ||||| || || ||||| |||||||| |||| || | | Sbjct 4691796 TGAGCCAGAGAAGAAGATACCCTCAACAGCAGCGAATGCCACCAGACGCTGACCAAACGA 4691855 Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 || || || | || |||||||| || ||||| |||||||| | || ||| || Sbjct 4691856 CGAAGCATCAT--CT-GCGATCCATTTCAAAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 4691912 Query 133116 CATCGTTTCGATGGCGTTCAACA 133138 || || || ||||||| |||| Sbjct 4691913 AATGGTGTCAATGGCGTCGAACA 4691935 >seq2 Length=5498963 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || ||||||||| |||| || ||| | | | Sbjct 3944233 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAAGTGGAGTCTAGC 3944292 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| |||| ||||| | || || || || ||||| | || || Sbjct 3944293 GATACCATTGACAACG-TTAAGTCCAAAATTCAGGATAAGGAAGGCATTCCTCCTGATCA 3944351 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || || || || || |||| |||||||| | |||||||| Sbjct 3944352 ACAGCGTCTCATCTTCGCTGGAAAGCAACTTGAAGACGGTCGCACCCTGAGTGACTACAA 3944411 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| |||||| | || || ||| | || || || Sbjct 3944412 CATCCAGAAGGAATCCACTCTCCATCTCGTCCTCCG 3944447 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| || ||||| | || |||||| | || Sbjct 3944461 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCC 3944520 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || ||| |||| || |||||||| ||||| | |||||| Sbjct 3944521 GACACCATCGACAATGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAA 3944580 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || |||||| |||| || | || || || ||||||||| Sbjct 3944581 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCAGACTACAAC 3944640 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || || ||||| | || || ||| | ||||| Sbjct 3944641 ATTCAGAAGGAGTCTACTCTTCATCTCGTGCT 3944672 Score = 107 bits (118), Expect = 2e-18 Identities = 156/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| || || || | || ||||| | || Sbjct 3944689 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCC 3944748 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || ||| |||| ||||||||||| || || | || || Sbjct 3944749 GACACCATCGACAACG-TCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATCA 3944807 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | || |||||||| |||| || | || || || ||||||||| Sbjct 3944808 GCAGCGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACAA 3944867 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTG 38456 |||||||||||| ||| || |||||||||||| || Sbjct 3944868 CATCCAAAAGGAGAGC-ACCCTGCATTTGGTGTTG 3944901 >seq1 Length=6137194 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || ||| || | ||||| || || ||||||||||| ||||||||| | || || ||| | Sbjct 5194939 AAGAATTCACAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTC 5194880 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | | | || || |||| ||||| || |||||||| | || Sbjct 5194879 GTCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCTCCGGA 5194820 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| | || | || || || ||||| || || | |||||||||| ||| || Sbjct 5194819 CCAGCAGCGATTGATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACCCTCAGCGATTA 5194760 Query 38420 CAACATCCAAAAGG 38433 |||||||||||||| Sbjct 5194759 CAACATCCAAAAGG 5194746 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 38334 CTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTG 38393 || ||||| ||||| || || | ||||| || || || || | ||| ||||| || || Sbjct 441016 CTAGACAAGGAGGGCATCCCACCTGACCAGCAACGTCTGATCTTCGCCGGCAAGCAACTC 441075 Query 38394 GACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTG 38453 || |||| || ||||| |||||||||||||| ||||| |||| ||||| ||||| Sbjct 441076 GAGGACGGCCGAACCCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACTTGGTC 441135 Query 38454 CTGCGT 38459 || ||| Sbjct 441136 CTTCGT 441141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172743730560