Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2 107 8e-18 seq1 107 8e-18 >seq2 Length=5498963 Score = 107 bits (118), Expect = 8e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| |||||||| || ||||||||||| || || ||||| || Sbjct 3944689 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCC 3944748 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || ||| || ||||| || || || || || |||||||| Sbjct 3944749 GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATCAG 3944808 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || || |||| |||||| | |||||||| ||||| | | || || || Sbjct 3944809 CAGCGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACAAC 3944868 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTG 391268 || | ||||| || || || || || || |||||| Sbjct 3944869 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTG 3944907 Score = 96.9 bits (106), Expect = 1e-14 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || || || || || || Sbjct 3944233 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAAGTGGAGTCTAGC 3944292 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| |||||| |||| |||||||| ||||||||||| ||||||||||||||| Sbjct 3944293 GATACCATTGACAACGTTAAGTCCAAAATTCAGGATAAGGAAGGCATTCCTCCTGATCAA 3944352 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 || ||| | || ||| | || || ||||||||||| || Sbjct 3944353 CAGCGTCTCATCTTCGCTGGAAAGCAACTTGAAGACGG 3944390 >seq1 Length=6137194 Score = 107 bits (118), Expect = 8e-18 Identities = 193/278 (69%), Gaps = 13/278 (5%) Strand=Plus/Minus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 |||| || || |||||||||||||| ||| | ||||| || |||||||| || || | Sbjct 4391745 TTACCGTGCCTGCTTATTTCAATGACATGCAAAGACAAGCCACCAAAGATGCTGGTCAGA 4391686 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 ||||||| | || || || || || | || ||||| || || ||||| ||||| |||| Sbjct 4391685 TTGCTGGCCTCAACGTCCTGCGTGTTGTCAACGAACCCACTGCTGCTGCCCTAGCTTATG 4391626 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | || | | ||| | ||| || | |||| || | |||| ||||||| | Sbjct 4391625 GCCTCG-------AGAAGGA--AGAGGACCGCATTATTGCCGTCTATGATCTTGGTGGTG 4391575 Query 451509 GAACTCATGATACTTCTGTACTTTC-AATTGAAGATGGG-GTATTTGAAGTAAAGGCAAC 451566 | || |||| ||| | | || || | ||| ||| || |||||||| ||| | || Sbjct 4391574 GTACCTTCGATA--TCTCCATTCTCGAAATCCAGAAGGGTGTCTTTGAAGTCAAGTCTAC 4391517 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 ||| ||||| ||||| | || ||||||||| | |||| Sbjct 4391516 CAACGGTGACACTCACTTGGGTGGTGAAGATTTCGATA 4391479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718172174972