Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3 448 6e-121 seq4 147 3e-30 seq1 125 9e-24 >seq3 Length=5104443 Score = 448 bits (496), Expect = 6e-121 Identities = 1056/1582 (67%), Gaps = 13/1582 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||||||| | || ||||| || ||||| | ||| || || ||||| || || Sbjct 1046651 TCATCTTCAGCCTTGTACTTCTCGGCATCAGCCAACATACGCTCGATATCTTCCTTGGAG 1046710 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | ||| || || | |||| || | Sbjct 1046711 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCAGTACCCTTCTCAACC 1046770 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| ||||||| ||||| || |||||||||||||| | || | ||||| || | Sbjct 1046771 GCAGAAACATTCATGATACCGTTGGCATCAACATCGAAGGTAACCTCGATTTGAGGAACA 1046830 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | ||| || || | || || || | || || | |||| ||| | Sbjct 1046831 CCACGAGGAGCAGGTGGGATGCCAGACAATTCGAACTTGCCGAGAAGGTTGTTGTCCTTG 1046890 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | ||| ||||| || || |||| || ||| ||||||| || || Sbjct 1046891 GTGCGGGCACGCTCACCCTCGTAAACTTGGATAAGCACACCAGGTTGGTTGTCGGAGAAG 1046950 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||| | | ||||| | ||||| || || |||| | || | | |||| Sbjct 1046951 GTAGAGAAGGTCTCGGACTTCTTGGTTGGAACAGTGGTGTTTCGCTTGATGAGTGCGGTC 1047010 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | ||| || ||| || | || | |||||| || | || |||||||| | | Sbjct 1047011 ATGACACCTCCAGCAGTCTCAATACCGACAGACAGTGGGGCAACATCCAAGAGAAGGATT 1047070 Query 6989 TCTTGAACAGATT-CGTTCCCTTCAC-CCGTTAAGA-TGGCGGCTTGGACCGTCGCCCCG 7045 || | ||||| || | | ||| |||| |||| |||||||| | || ||| Sbjct 1047071 TCGTTGGTAGATTTCGAGGAAGTATCTCCGGAAAGAATGGCTGCTTGGACAGCGGCACCG 1047130 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||||||||| || | || || | || || ||||| || | || Sbjct 1047131 TAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCA 1047190 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | | || || ||||| || || || || || || | ||||| || | Sbjct 1047191 GAGACAAGCTTCTGGATACGTGGGATACGGGTAGAGCCTCCAACGAGGACGATCTCGTGA 1047250 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || | || || || ||||| | ||| || || ||||| || ||||| Sbjct 1047251 ACGCTGGACTTGTCAATCTTGGCGTCGCGGAGGACACGCTCGACGGGGTCCATGGTGGAG 1047310 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | |||| || |||||||| || || ||||| || || || || |||||||| Sbjct 1047311 CGGAAGAGGTCCTGGCAAAGTTCCTCGAATCGGGCACGAGTGATTGAGGTGTAGAAATCG 1047370 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | ||| ||| | | || || ||||| || | || || || | |||||| | || ||| Sbjct 1047371 ATGCCTTCGAAAAGAGAGTCGATTTCGATAGAGGTCTGAGCAGACGAAGAAAGAGTGCGC 1047430 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || || || || || || || | ||| |||||||| || | ||| | | ||| Sbjct 1047431 TTGGCACGTTCGCAAGCAGTGCGGAGACGTCGAAGGGCGCGAGCGTTGGAGCTGAGATCC 1047490 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 || |||||| | |||||||| | |||||| | ||| | ||||||||| Sbjct 1047491 TTGCGATGTTTTCTCTTAAACTCGCTAACGAAGTGGTTGACGAGACGGTTGTCGAAATCT 1047550 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 |||||||||||||| ||||| || || || | |||||||| ||||| || | |||||| Sbjct 1047551 TCACCACCCAAGTGAGTATCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCCTCAATG 1047610 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | || | || ||||| || ||||||||||| || || || ||||| || ||| || Sbjct 1047611 GTCAAGAGGGAGACATCGAAGGTACCACCACCAAGATCGAAGATGAGAACATTCCGCTCA 1047670 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 | || | ||||| ||||| ||||| || ||||| || || || ||||| || || ||| Sbjct 1047671 CCCTCAGTCTTCTTGTCGAGGCCGTAGGCAATAGCGGCAGCAGTGGGTTCGTTGATGATA 1047730 Query 7646 C-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATC 7704 | || |||| || || |||||||| | ||||| || || ||||| || || || || Sbjct 1047731 CGGAGGACA-TTAAGACCAGCAATGAGACCGGCATCCTTGGTGGCTTGACGCTGAGAGTC 1047789 Query 7705 GTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTC 7764 ||| |||||||| || || || || || |||| |||| | ||| ||||| || || Sbjct 1047790 GTTGAAGTAGGCAGGAACTGTGACAACTGCGTTGTTGACGGTGCCACCAAGATATGACTC 1047849 Query 7765 CGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT-T 7823 || | ||| ||| ||||| || | |||||| || || ||||| | | || ||| | Sbjct 1047850 GGCAGTCTCTCGCATCTTGGTCAGGATCATCGAAGAGATTTCTTCGGGTGTGAA-TGTCT 1047908 Query 7824 TCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCT 7883 | ||||| || || || ||||| |||| | ||| || ||| || | || |||| Sbjct 1047909 TGGTTTCGCCCTTGAATTCAACCTCAACGACGGGCTT-GCCG--GCCTTGTCAATGACCT 1047965 Query 7884 TATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAA 7943 | | | | | |||||| ||| | || |||| || | ||||| | ||||| | Sbjct 1047966 TGAAGGGAAAGTGTTTCATGTCGGCCTGAACCTCAGCATCGGCGAACTTGCGACCGATCA 1048025 Query 7944 GACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGT 8003 | ||||| ||||| || |||||||| | ||||||||||| ||| ||||| || || | Sbjct 1048026 GTCGCTTGGCATCGAAGACTGTGTTGTGAGGGTTCATGGCGACTTGATTCTTTGCAGCAT 1048085 Query 8004 CCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCC 8063 | ||||| ||||| || | | || || || || ||| | || ||||| || || || | Sbjct 1048086 CACCGATCAGACGCTC---AGTGTCTGTGAAAGCAACGAAGGAGGGGGTGGTGCGGTTGC 1048142 Query 8064 CTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACG 8123 | || ||||| ||||| || || | |||||| | | ||| |||||| || || || | Sbjct 1048143 CCTGATCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATGCCGACACATGAGTAGG 1048202 Query 8124 TTGTTCCTAAATCAATACCGAT 8145 |||| |||| ||| ||||| || Sbjct 1048203 TTGTACCTAGATCGATACCTAT 1048224 >seq4 Length=4953330 Score = 147 bits (162), Expect = 3e-30 Identities = 215/302 (71%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || | ||||||||| || ||||| || ||||| || ||||| || | ||| Sbjct 4493662 TCGAAGTCCTGACCACCCAAATGGGTATCACCTGCGGTGGCCTTGACGGTGAAAACACCA 4493721 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || | |||||| || | || ||||| || ||||||||||| || || | ||||| ||| Sbjct 4493722 CCCTGAATGTTCAAGAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACG 4493781 Query 7577 TTCGTATCGTCGTC--TTTGTTCTTAT-CGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| | | | | || ||||||| || ||||| || || || || || Sbjct 4493782 TTTCGCTCCTTGTCGGTCTTTCCGGATCCGAGACCATAAGCGATGGCAGCGGCGGTAGGC 4493841 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || ||||| || ||| || ||||| || | | ||||| || || |||||| Sbjct 4493842 TCGTTGATGATACGGAGCACGTTGAGACCAGCGATGGCACCAGCATCCTTGGTGGCTTGT 4493901 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || ||||| |||||||| ||||| || ||||| || | | ||| ||||| ||| Sbjct 4493902 CGCTGGTTGTCGTTGAAGTAGGCTGGGACTGTGACGACAGCCTTCTCGACCTTCTTGCCG 4493961 Query 7754 AG 7755 || Sbjct 4493962 AG 4493963 Score = 134 bits (148), Expect = 2e-26 Identities = 250/360 (69%), Gaps = 8/360 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||||||| || | || ||||| || || || || ||| || || | ||| Sbjct 3436768 ATCGAAATCTTCACCGCCAAGATGGGTATCACCAGCAGTAGCCAGGACCTCGAAAACACC 3436709 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | ||||| | || || ||||| || || |||||||| || || | | || || Sbjct 3436708 GTCGTCAATTGAGAGCAGAGAGACATCGAAAGTGCCACCACCGAGATCGTAGACGA-TAA 3436650 Query 7576 GTTCG-TATCGTCGTCTT--TGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || | | || | |||| || |||| ||||| || || |||||||| || ||||| || Sbjct 3436649 TTTGGCTTTCCT--TCTTGCTGGTCTTGTCGAGTCCATAGGCGATAGCTGCGGCCGTAGG 3436592 Query 7633 TTCATTAATAATACGAAGA-CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || | | || ||| |||| || || || || | ||||| || || || | Sbjct 3436591 CTCGTTGACGACGCGGAGAACAGT-CAAACCTGCGATCACACCAGCATCCTTTGTAGCCT 3436533 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 |||| || ||||| || ||||| ||||| || ||||| |||| ||||||||||| | Sbjct 3436532 GTCGCTGGTTGTCGTTGAAATAGGCTGGGACGGTGACGACGGCGTGGGTGACTTTCTTGC 3436473 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | || || || || |||| || ||||| ||| | |||||| | |||| |||||||| Sbjct 3436472 CAAGGTATGACTCTGCGACTTCCTTCATCTTGCCCAAAACCATGGCCGAAACCTCTTCAG 3436413 >seq1 Length=6137194 Score = 125 bits (138), Expect = 9e-24 Identities = 240/344 (70%), Gaps = 16/344 (5%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||||||||| || || || ||| | ||||||||||||| ||| Sbjct 4391480 ATCGAAATCTTCACCACCCAAGTGAGTGTCACCGTTGGTAGACTTGACTTCAAAGACACC 4391539 Query 7516 TCCTTCAATGTTTA-ACAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATG--A 7571 |||| ||| | || | | | ||| || ||||||||||| || ||| | | | | Sbjct 4391540 --CTTCTGGATTTCGAGAATGGAGATATCGAAGGTACCACCACCAAGATCATAGACGGCA 4391597 Query 7572 GTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 || | || ||| |||| |||| |||| || || || | || || || || | Sbjct 4391598 ATAA-TGCG----GTCCTCTTCCTTCT---CGAGGCCATAAGCTAGGGCAGCAGCAGTGG 4391649 Query 7632 GTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 |||| || | || ||| || ||| ||||||||||| | |||||||| || |||| Sbjct 4391650 GTTCGTTGACAACACGCAGGACGTTGAGGCCAGCAATCTGACCAGCATCTTTGGTGGCTT 4391709 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 ||| |||| || || || || || || || || ||||| ||| | |||| ||| | Sbjct 4391710 GTCTTTGCATGTCATTGAAATAAGCAGGCACGGTAACGACGCCGTTCTTGACGGGCTTGC 4391769 Query 7752 CGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCAT 7794 ||||||||| || || | || ||||| ||| | ||| ||||| Sbjct 4391770 CGAGATACGCCTCGGCAGTCTCCTTCATCTTTTGCAAG-ACCAT 4391812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132728547560