Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6 176 6e-39 seq3 109 7e-19 seq2 91.5 2e-13 >seq6 Length=3112757 Score = 176 bits (194), Expect = 6e-39 Identities = 642/987 (65%), Gaps = 26/987 (3%) Strand=Plus/Minus Query 112014 GAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAG 112073 |||||||||||||| ||| || | |||| || | || | ||||| || | || Sbjct 986237 GAGCCATGGCACGCCGATGTCTTCGAGTGGCTGAACCTGAGAAAGAACCATGGCAAGGAA 986178 Query 112074 GAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAG 112132 || | || ||| || || || |||| ||| || |||| || |||||||||||| || | Sbjct 986177 GAAGTTCG-TGCTCGTGACCTGTTCTACGCCCTGTGGACACCCGATCTCTTCATGCAGCG 986119 Query 112133 AGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA 112192 |||||| ||| ||||| | || || || || || |||| || |||||| | || Sbjct 986118 TGTTGAGAAGAACCAGGATTGGACCCTTTTCTGCCCCAACGAGGCTCCTGGTCTCGCTGA 986059 Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252 || || ||||||| |||||||| ||| | |||||||| ||||| | || | | | Sbjct 986058 TGTTTATGGCAAGGAGTTCGAAGCCCTTTACGAACAGTACGAGAAAGAAGGCCGCG-GTC 986000 Query 112253 TGC-GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 112310 | ||| || ||| | || | | ||| | || |||||| || | || |||||||| Sbjct 985999 GCCAGACTGTCAAAGC-CCAGAAGCTCTGGTACGCCATTCTCGAGGCACAGACCGAGACC 985941 Query 112311 GGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 112370 ||||| || |||||||| ||||| || ||||| ||| | ||||| || || |||||| | Sbjct 985940 GGTACCCCTTATATGCTGTACAAGGATGCCTGCAACGAGAAGAGCAACCAGAAGAATCTT 985881 Query 112371 GGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430 ||| |||| || ||||| || || || || || | || | ||| | |||||| Sbjct 985880 GGTACCATCAGAAGCTCCAATCTTTGCACCGAGATTGTCGAGTATACTGCTCCCGATGAG 985821 Query 112431 ACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCA----GAGAC 112486 || || || || || || || ||||||| |||| | ||| || | | | | | Sbjct 985820 GTTGCCGTCTGCAATCTTGCCTCCCTCGCTCTGCCCACCTTTGTTGACCAAGCTCGGGGC 985761 Query 112487 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAA 112546 || || || | || || |||||||| | ||| || ||| | || Sbjct 985760 GAATAC----GACTTTGGTCGTCTGCACGAAGTCGTTCAGGTTGTGACCCGCAACTTGAA 985705 Query 112547 CAGAGTTATTGATAGAAATTTTTACCCCG---TTGAGACTGCTCGTAA-ATCTAATATGA 112602 || | ||||| || | ||||||| |||| || | || | | | || | Sbjct 985704 CAAGATCATTGACGTCAACTACTACCCCGTCATTGA---AGCACAAAACAGCAACTA-CA 985649 Query 112603 GACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGC 112661 ||||||| || |||| | || || |||||||||||||||| ||| || || || || Sbjct 985648 GACACCGCCCCGTTGGCTTGGGCGTTCAAGGTCTCGCGGATGCCTTCCTTGCTCTG-CGT 985590 Query 112662 CACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTAT 112721 | | || || || |||||| | |||| | || |||||||| || || Sbjct 985589 CTACCTTTCGACTCTCCCGAAGCACGCCAGCTCAACATCCAGATCTTTGAGACCATCTAC 985530 Query 112722 CACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781 || || |||||| || | | |||| | | || ||||| || | || | Sbjct 985529 CATGCTGCTCTTACTGCATCCTGCCAACTGGCTCAAGAAGAGGGTCCTTACTCTAGCTAT 985470 Query 112782 GAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAA 112840 | || |||| || ||||| | ||||| | ||| |||| |||| || | ||| Sbjct 985469 CAAGGCAGCCCAGTCTCCCAAGGCATTCTTCAGTATGACATGT-GGAACGTCACCCCCAC 985411 Query 112841 GCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 112900 || || || ||||| |||||||||| ||| || | ||| |||| ||| Sbjct 985410 AGATCTCTGGGATTGGGATGCTCTCAAGGCTGAAATCGCCAAGCACGGTGTTCGCAACTC 985351 Query 112901 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960 |||| | | ||||| |||||||| || || ||| | || ||| | || || ||||| || Sbjct 985350 TCTTCTCGTTGCACCCATGCCAACTGCATCGACCTCTCAGATCCTTGGCAACAATGAGTG 985291 Query 112961 CTTTGAACCCTACACGACGAACATCTA 112987 ||| || || ||||| | |||||||| Sbjct 985290 CTTCGAGCCATACACCTCCAACATCTA 985264 >seq3 Length=5104443 Score = 109 bits (120), Expect = 7e-19 Identities = 208/302 (69%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 102033 GAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTC 102092 |||| |||||| ||||| |||| || || ||||| | | |||| | || Sbjct 4691993 GAGATGTACAGTTTGCTCATCGACACATACATCAAGGACCCTAAGCAAAAGACCTACCTG 4691934 Query 102093 TTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 102152 || || ||||| | || |||| || || | ||||| || || |||||| |||| ||| Sbjct 4691933 TTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAATGG 4691874 Query 102153 TTTG-ATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 102211 | | | | | | ||| | |||| | |||| || | ||||| || ||||||||| Sbjct 4691873 ATCGCAGATGATGCTTCGT-CGTTTGGTCAGCGTCTGGTGGCATTCGCTGCTGTTGAGGG 4691815 Query 102212 TATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGA--GGTCTCATG 102269 ||||||||||||||| || ||| ||| || | ||| | ||| || | || || ||| Sbjct 4691814 TATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAG--GCCAAGGGACTTATG 4691757 Query 102270 CCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTT 102329 || ||| | ||||||||||||| | |||||||| |||||||| | ||| || ||| Sbjct 4691756 CCTGGTTTGACCTTCTCCAACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTTT 4691697 Query 102330 GC 102331 || Sbjct 4691696 GC 4691695 >seq2 Length=5498963 Score = 91.5 bits (100), Expect = 2e-13 Identities = 216/319 (68%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 176750 CCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCT 176809 || |||| ||| ||| ||||||||||| | | |||| || ||||| | | || Sbjct 2338654 CCATCGTGATCCTGATCAGTCATGATCATCAAATGACCGTAACGAAGGCCTTGAGTGTCG 2338595 Query 176810 TGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA-GATCGTTGAACTCT-TGGT 176867 ||| |||| ||||| ||||| | || ||||||| | || |||| ||| || Sbjct 2338594 GTGTAGACCTTCTTGTGTTGGAGACCAAGGAAATTCTTGATGTTC--TGAA-TCTCTGCA 2338538 Query 176868 TTGATGTGAGCTGTGT--GACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGG 176925 || || ||| | || ||||||||||||||||||||| |||| |||||||| || Sbjct 2338537 TTCTTG-GAGATTTGATCGACAGAGGCATCACGAACATTGAGCAACTTTCCACGAAGCGG 2338479 Query 176926 GAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGC 176985 ||| || || | |||| ||||||| || || |||| || | || || ||| || Sbjct 2338478 GAAAACTCCAAACAGATCCGGACCAACAACGGAACGACCTGCCATGGCAAGACCTTTGGC 2338419 Query 176986 AGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGCCGTACCCGCCTTGTT 177045 |||||||| || || | ||| | ||||| ||| || | || || || ||||| Sbjct 2338418 TGAATCACCTTCAGTAAGGATCAAGGTACATTTGTGGCCTTCTCTGGTCCCGGCTTTGTT 2338359 Query 177046 CGCATCATCCAATTTGGGA 177064 || || |||||||||| Sbjct 2338358 GGCGTCGGTCAATTTGGGA 2338340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742330166480