Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2 159 8e-34 seq1 129 1e-24 seq6 102 2e-16 >seq2 Length=5498963 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || || |||||||| ||||| || ||||| ||||| || | ||||| | Sbjct 3944678 AGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGA 3944619 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | ||| ||||| |||||||| | ||| ||||||||||||||||| || ||| Sbjct 3944618 CCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCT 3944559 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || ||||| || ||| |||||| || || |||||||| || || ||||| || || Sbjct 3944558 TTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCTAGAGTG 3944499 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||| | || || ||||| | |||||| Sbjct 3944498 ATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| || | || || ||| ||| ||||| || ||||| |||| |||||||| Sbjct 3944906 AGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGA 3944847 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | || || ||||| ||||| | ||| || || || || || || || ||| Sbjct 3944846 CCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCT 3944787 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || ||| ||||||||| || |||||||| || ||| ||||| || ||| Sbjct 3944786 TTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACTTCTAGAGTA 3944727 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| ||||| ||||| | ||||| Sbjct 3944726 ATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || |||||||| || || || || ||||| || || || | || ||||| Sbjct 3944441 ACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCA 3944382 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || || ||||| || |||||||||||||| || || ||| Sbjct 3944381 AGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCCTGA 3944322 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||| ||||| |||||||| || | |||||||| ||||| | |||||| Sbjct 3944321 ATTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTTT 3944262 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | |||||| Sbjct 3944261 CCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 132 bits (146), Expect = 1e-25 Identities = 144/189 (76%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || | || || || ||||| || ||||||||| || || | ||||| ||| Sbjct 3944213 ACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCCTCG 3944154 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || ||||||||||| ||||| || || |||||||||||||| || || || Sbjct 3944153 AGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGG 3944094 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || |||||| || |||||||||| | | || ||||| |||||||| | |||| Sbjct 3944093 ATCTTGGACTTGACATTGTCAATGGTGTCGCTGGAC--TCCACCTCAAGGGTGATGGTCT 3944036 Query 195110 TTCCTGTCA 195118 |||| |||| Sbjct 3944035 TTCCGGTCA 3944027 >seq1 Length=6137194 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| || ||||||||| || || | ||||||||||||||||| || || ||||| Sbjct 5194748 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATC 5194807 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | ||| || ||||| |||||||| ||||| |||||||| || || |||||| || || Sbjct 5194808 AATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 5194867 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 |||||||| || ||||| |||||||| | ||||| || || | || || ||||| Sbjct 5194868 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 5194926 >seq6 Length=3112757 Score = 102 bits (112), Expect = 2e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||||||| | ||||| ||||||| |||||| || | || | | || ||||||| Sbjct 986156 TTCTACGCCCTGTGGACACCCGATCTCTTCATGCAGCGTGTTGAGAAGAACCAGGATTGG 986097 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | ||||||||| ||||| || || ||||| || | |||||||||||| |||||||| Sbjct 986096 ACCCTTTTCTGCCCCAACGAGGCTCCTGGTCTCGCTGATGTTTATGGCAAGGAGTTCGAA 986037 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGG 160737 | ||||| ||| ||||| ||||| || Sbjct 986036 GCCCTTTACGAACAGTACGAGAAAGAAGG 986008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481472062903