Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3 136 3e-26 seq4 107 2e-17 seq2 98.7 8e-15 seq1 96.9 3e-14 >seq3 Length=5104443 Score = 136 bits (150), Expect = 3e-26 Identities = 460/706 (65%), Gaps = 19/706 (3%) Strand=Plus/Minus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 || ||||| ||||| | |||||||||||| | ||||| || ||||||| || | || Sbjct 1047468 GCCCTTCGACGTCTCCGCACTGCTTGCGAACGTGCCAAGCGCACTCTTTCTTCGTCTGCT 1047409 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 || ||| |||| ||| | || || | || || || || |||| | || | || | Sbjct 1047408 CAGACCTCTATCGAAATCGACTCTCTTTTCGAAGGCATCGATTTCTACACCTCAATCACT 1047349 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | ||| ||| || || |||| || ||||| | || || || || || || Sbjct 1047348 CGTGCCCGATTCGAGGAACTTTGCCAGGACCTCTTCCGCTCCACCATGGACCCCGTCGAG 1047289 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | || | | || | |||||||| || |||| || || || || || || ||||| Sbjct 1047288 CGTGTCCTCCGCGACGCCAAGATTGACAAGTCCAGCGTTCACGAGATCGTCCTCGTTGGA 1047229 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAA--TGT---TAAGTTCTTATTTCAATGGTA 552189 || ||||| | || || || | ||| ||| | | ||||| ||| || | Sbjct 1047228 GGCTCTACCCGTATCCCACGTATCCA-GAAGCTTGTCTCTGACTTCTT----CAACGGCA 1047174 Query 552190 AAAAATTAAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCA 552247 | | || |||| | || || ||||||||||||||||| |||||||| | || Sbjct 1047173 AGGAGCCCAAC--AAGTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCA 1047116 Query 552248 AGCAGCTATTCTTTCTGGACAAAC-TGATGAAAAACTACAAA--ATATTGTACTTGTAGA 552304 |||||| |||||||| ||| | || | | ||| |||| || | || | || | || Sbjct 1047115 AGCAGCCATTCTTTCCGGAGATACTTCCTCGAAATCTACCAACGAAATCCTTCTCTTGGA 1047056 Query 552305 TGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGA 552364 |||| | || || ||| | ||| | || || | ||||||| | ||||| || ||| | Sbjct 1047055 TGTTGCCCCACTGTCTGTCGGTATTGAGACTGCTGGAGGTGTCATGACCGCACTCATCAA 1046996 Query 552365 TAGAAATACTACTATTCCTTGTAAAAAATCTCGTG-TATTTTCTACGTATTCAGATAATC 552423 |||| || ||| |||| || || || || | || ||||| | || || || | Sbjct 1046995 GCGAAACACCACTGTTCCAACCAAGAAGTC-CGAGACCTTCTCTACCTTCTCCGACAACC 1046937 Query 552424 AAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATC 552483 || ||| ||| || ||| ||| || || || | ||| || || || || | Sbjct 1046936 AACCTGGTGTGCTTATCCAAGTTTACGAGGGTGAGCGTGCCCGCACCAAGGACAACAACC 1046877 Query 552484 AACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTG 552543 || || | || | || || || || |||||||||||||| || || ||||| | Sbjct 1046876 TTCTCGGCAAGTTCGAATTGTCTGGCATCCCACCTGCTCCTCGTGGTGTTCCTCAAATCG 1046817 Query 552544 AAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 | ||||| |||||| | |||||||| || || ||||||| |||| Sbjct 1046816 AGGTTACCTTCGATGTTGATGCCAACGGTATCATGAATGTTTCTGC 1046771 >seq4 Length=4953330 Score = 107 bits (118), Expect = 2e-17 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| || || |||||||||||| ||| || ||||| ||| ||||| |||||| Sbjct 3436028 ATCGGTATTGACTTGGGAACCACATATTCTTGCGTCGGTGTGATGCAGAATGGAAAAGTT 3436087 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| |||| ||| || ||||| ||||||| ||| || || ||||| | || || || Sbjct 3436088 GAAATCATTGTCAACGACCAAGGAAACAGAATTACCCCCTCATATGTGGCCTTTACCGAC 3436147 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 |||| || ||||| || || ||||| |||| | |||||||| | || Sbjct 3436148 GACGAACGGTTGGTTGGCGACGCTGCAAAGAATCAGTATGCGTCAAATCCTACAAGGACC 3436207 Query 550175 ATTTTTGAT 550183 ||||||||| Sbjct 3436208 ATTTTTGAT 3436216 >seq2 Length=5498963 Score = 98.7 bits (108), Expect = 8e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| ||||| || ||||| || || ||| || || ||||| ||| || || | Sbjct 3944451 GAGGCGGAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCG 3944392 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||||||||| ||||| || || || || | || |||||||||||||| ||||| Sbjct 3944391 ACCGTCTTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTC 3944332 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||| |||||||| || || ||||| ||||| | || | || |||||| | Sbjct 3944331 CTTATCCTGAATTTTGGACTTAACGTTGTCAATGGTATC-GCTAGACTCCACTTCGAGGG 3944273 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || || || ||||| || ||||| ||||||||| Sbjct 3944272 TGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCATA 3944232 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/137 (76%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || |||||||| | |||| ||| ||||| || |||||||| ||| || Sbjct 3944223 GAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGG--ATGTTGTAATCGCTTAGGGTG 3944166 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||| || ||||| ||||| || || ||||| | |||||||||||||||||| ||| Sbjct 3944165 CGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCT 3944106 Query 563374 TCTTTATCTTGAATTTT 563390 || ||||| || || || Sbjct 3944105 TCCTTATCCTGGATCTT 3944089 Score = 93.3 bits (102), Expect = 3e-13 Identities = 148/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 563271 ATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGT 563328 ||| ||||| || || ||||| || ||||| || | ||||||| |||||| | | Sbjct 3944892 ATGCAGGGTGCTCTCCTTTTGG--ATGTTGTAGTCGGAAAGAGTTCGACCATCTTCCAAT 3944835 Query 563329 TGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATT 563388 ||||| || ||||| || | || ||||||||||| || || || ||||| ||||| || Sbjct 3944834 TGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCTTTGTCTTGGATC 3944775 Query 563389 TTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACC 563447 ||| || || || || || || | || | | ||| ||||||| ||| || || Sbjct 3944774 TTTGACTTGACGTTGTCGATGGTGTC-GGACGATTCGACTTCTAGAGTAATAGTCTTGCC 3944716 Query 563448 AGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| || ||||| ||||| || |||||| Sbjct 3944715 AGTCAGGGTTTTGACGAAGATCTGCATA 3944688 >seq1 Length=6137194 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || ||||| |||||| ||| | ||||| || ||||||||||| | ||| Sbjct 4391743 ACCGTGCCTGCTTATTTCAATGACATGCAAAGACAAGCCACCAAAGATGCTGGTCAGATT 4391684 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || || || || ||| || |||| ||||| ||||||||||| || || ||||| Sbjct 4391683 GCTGGCCTCAACGTCCTGCGTGTTGTCAACGAACCCACTGCTGCTGCCCTAGCTTATGGC 4391624 Query 550529 CTTGATAA 550536 || || || Sbjct 4391623 CTCGAGAA 4391616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029295524039410