Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 >seq2 Length=5498963 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| ||||| || || || || ||||| || | | ||| | |||| ||||| || Sbjct 3944664 ATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTCCAACTG 3944605 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||||| || || ||||| |||||||| || || ||||| || ||||||||||| || || Sbjct 3944604 TTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTGGATCTT 3944545 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | || ||| | || | ||||| || | || ||||| ||||||| || ||||| || Sbjct 3944544 TGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCTAGAGTGATTGTCTTGCCTGT 3944485 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 3944484 GAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| | ||||||||| ||||| || ||||||||| | || | | |||| || | ||| Sbjct 3944208 ATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCCTCGAGTTG 3944149 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || || | || || ||||| || ||||||||||| ||||| || || || Sbjct 3944148 CTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGATCTT 3944089 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | ||||| | ||||| ||||| |||| || || ||||| Sbjct 3944088 GGACTTGACATTGTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 3944029 Score = 86.0 bits (94), Expect = 5e-12 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| || || ||||| || || || ||||| || | || | | || || | ||| Sbjct 3944436 ATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTG 3944377 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || || || || | |||||||||||| || ||||||||||| ||||| |||||||| Sbjct 3944376 CTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTT 3944317 Query 101386 TTGTTTTACAATTTCTACAGTGTC---AGACGTTTCCACTTCAAGAGTGACCGTTTTGCC 101442 || || | || | || || |||| |||||||| || |||| || || || Sbjct 3944316 GGACTTAACGTTGTCAATGGTATCGCTAGAC---TCCACTTCGAGGGTGATGGTCTTTCC 3944260 Query 101443 GGTTAAAGTTTTTACAAATATCTGCAT 101469 ||| | ||| || || || || ||||| Sbjct 3944259 GGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278356533213