Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq3 120 2e-21 seq2 116 2e-20 >seq3 Length=5104443 Score = 120 bits (132), Expect = 2e-21 Identities = 348/531 (66%), Gaps = 6/531 (1%) Strand=Plus/Minus Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || |||||||| || || || || | || || || || | ||| |||| || || Sbjct 1048164 GAGATCATTGCCAACGATCAGGGCAACCGCACCACCCCCTCCTTCGTTGCTTTCACAGAC 1048105 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 ||||| | ||| || || |||||||| || |||||| || || ||| || || Sbjct 1048104 ACTGAGCGTCTGATCGGTGATGCTGCAAAGAATCAAGTCGCCATGAACCCTCACAACACA 1048045 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || ||||| || || |||| ||||| || || | ||| | || || | || Sbjct 1048044 GTCTTCGATGCCAAGCGACTGATCGGTCGCAAGTTCGCCGATGCTGAGGTTCAGGCCGAC 1047985 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629 ||| || | || || ||||| || | | || || || | || | || Sbjct 1047984 ATGAAACACTTTCCCTTCAAGGTCATTGACAAGGCCGGCAAGCCCGTCGTTGAGGTTGAA 1047925 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || ||||| || ||| |||| ||| |||| ||||| ||| | | ||| Sbjct 1047924 TTCAAG--GGCGAAACCAAGACATTCACACCCGAAGAAATCTCTTCGATGATCCTGACCA 1047867 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACT 474748 | ||| | | || || ||| ||||||||||| || | | ||||| | || Sbjct 1047866 AGATGCGAGAGACTGCCGAG-TCATATCTTGGTGGCACCGTCAACAACGCAGTTGTCACA 1047808 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 ||||| || || || || || ||||| |||||||| || || ||||| || ||||| Sbjct 1047807 GTTCCTGCCTACTTCAACGACTCTCAGCGTCAAGCCACCAAGGATGCCGGTCTCATTGCT 1047748 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTT 474868 ||||||||||| | ||||| || || ||||| || || ||||| |||| || || || Sbjct 1047747 GGTCTTAATGTCCTCCGTATCATCAACGAACCCACTGCTGCCGCTATTGCCTACGGCCTC 1047688 Query 474869 GATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 || ||||| |||| || |||||| | ||||| ||| ||| ||| Sbjct 1047687 GACAAGAAGACTGAGGGTGAGCGGAATGTTCTCATCTTCGATCTTGGTGGT 1047637 >seq2 Length=5498963 Score = 116 bits (128), Expect = 2e-20 Identities = 119/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||||||||||||||| || || ||||| ||||||||||||||||| |||||||| Sbjct 3944387 TCTTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTA 3944328 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAAGGGTAAT 480736 || ||||| || || || ||||| ||||| | | | | ||| ||||| || Sbjct 3944327 TCCTGAATTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTCCA-CTTCGAGGGTGAT 3944269 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||||||||| ||||| ||||| Sbjct 3944268 GGTCTTTCCGGTGAGAGTCTTGACGAAGATTTG 3944236 Score = 98.7 bits (108), Expect = 6e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || |||||||| | ||| ||| || | || ||||| ||| || Sbjct 3944226 ACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGT 3944167 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || |||||||||||||| || ||||| ||||| |||||||||||||| || Sbjct 3944166 GCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCC 3944107 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||| || || ||||| |||||| ||||| || || Sbjct 3944106 TTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTC 3944065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178813946332