Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq2 123 5e-23 >seq2 Length=5498963 Score = 123 bits (136), Expect = 5e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || || || | ||||| |||| ||||||||||| || |||||||| |||| Sbjct 3944871 GATGTTGTAGTCGGAAAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCG 3944812 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| ||||||||||| || || ||||| ||||| || || || || || || | Sbjct 3944811 CTGCTGATCAGGTGGGATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGT 3944752 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || |||||||| |||||||||||||| || || ||||| | ||||| | || ||||| Sbjct 3944751 GTCGGACGATTCGACTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTG 3944692 Query 192534 CAT 192536 ||| Sbjct 3944691 CAT 3944689 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| || | | || | ||| | ||||| ||| || || || || || Sbjct 3944690 ATACCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCT 3944631 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| ||||| |||||||| || ||||| |||| |||||| || || Sbjct 3944630 GACAGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGA 3944571 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||||||||| || || || ||||| || | || || || || Sbjct 3944570 GGAATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCG 3944511 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||||||| || || || || || | || || | || || ||||| Sbjct 3944510 ACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479886477150