Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 4e-13 seq4 91.5 4e-13 >seq6 Length=3112757 Score = 91.5 bits (100), Expect = 4e-13 Identities = 500/788 (63%), Gaps = 15/788 (2%) Strand=Plus/Plus Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCT--ACAATCTCACAGC 155649 || || ||||| || || ||| ||| | | | || |||| || |||||||| || Sbjct 985798 GAGGCAAGATTGCAGACGGCAACCTCATCG--GGAGCAGTATACTCGACAATCTCGGTGC 985855 Query 155650 ACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACT-GTTACAAGCA 155708 | || || || || ||||||| || | |||||||||||| | | | || ||| || ||| Sbjct 985856 AAAGATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTT-GCTCTTCTCGTTGCAGGCA 985914 Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAG 155768 |||||||| || || || ||||| || ||||| ||||||| || ||||| |||| Sbjct 985915 TCCTTGTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAG 985974 Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATA--TTTCATATACA 155826 || | |||| || | || | | |||||| ||| || ||| || | Sbjct 985975 AGCTTCTGGGCTTTGACAGTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGG 986034 Query 155827 GCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 || ||| | | |||| || ||| |||| || ||||| || | |||||| || | Sbjct 986035 GC-TTC-GAACTCCTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAA 986092 Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 | | |||| | || ||||||| ||| || | ||| | ||| | || | Sbjct 986093 GGGTCCAATCCTGGTTCTTCTCAACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGT 986152 Query 155947 AGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATT 156006 |||| ||||| | || || || | ||| || ||||| | || | | | | Sbjct 986153 AGAACAGGTCACGAGCACGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGCCACT 986212 Query 156007 CCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC---TCTTGC 156063 | | ||| | || |||||||| || || ||||| ||| || | |||| Sbjct 986213 CGAAGACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGGGCCGCTTGTTGC 986272 Query 156064 CACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCAT 156123 | ||||| || || || |||||||| || |||||||| | ||||| || || | || | Sbjct 986273 CTCCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGT 986332 Query 156124 TGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTA 156183 | || ||||| ||||||||| |||| || |||| | |||| |||| | | Sbjct 986333 TTGATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAATGCAATGAGCGTTGA 986392 Query 156184 GTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATAC 156243 | |||||||| || | || || || || || ||| | ||||| | || | Sbjct 986393 GACCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATAGATGC 986452 Query 156244 CTTCAATAGAATC-ATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGT 156302 ||||||| || |||| | | ||| |||| || || || ||| | || Sbjct 986453 CTTCAATGCTGTCGGACTTCATGTCAATCAAGA-AGCAGGATGACAACTGGGGTTGAGGA 986511 Query 156303 GTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCG 156362 || ||||||||||| || || || | |||||| | || |||| | ||||| | | Sbjct 986512 GTGCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAGCACTTCTGGGACATGAGGTTG 986571 Query 156363 TATGTCTC 156370 |||||||| Sbjct 986572 TATGTCTC 986579 >seq4 Length=4953330 Score = 91.5 bits (100), Expect = 4e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 289027 TTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 || |||| ||| || ||||| || |||||||| | || |||| ||| | | ||| || Sbjct 159450 TTTCCAATAGCGTCGATTTCATCGATGAAAATGATGCAGGGAGCATTCTTGCGTGCATTT 159509 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 || || || || | ||| || || | || | ||| ||| |||||||||||||||| || Sbjct 159510 GCGAACAAGTCACGTACTCGCGACGGACCGACACCCACAAACATTTCTACAAATTCGGAG 159569 Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | || || | ||| | || | |||||| || |||| | |||| |||||| Sbjct 159570 CCCGACACCGAGAAGAAGGGGACGCCAGATTCGCCAGCCGTTGCCTTTGCCAACAGTGTC 159629 Query 289207 TTACCTGTTCCAGGTGGTCC 289226 ||||| |||||||| || || Sbjct 159630 TTACCAGTTCCAGGAGGGCC 159649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817430281033