Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4 154 2e-31 seq6 136 5e-26 seq3 104 3e-16 >seq4 Length=4953330 Score = 154 bits (170), Expect = 2e-31 Identities = 109/125 (87%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 |||||||| | || |||||||||||||||||||||||||| ||||| || ||| |||| Sbjct 2887237 CTCTTTGAAATCATTCTCGCCGCCAACTACCTCGACATCAAACCTCTTCTGGATGTTGGA 2887178 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | ||||||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct 2887177 TGCAAGACAGTGGCCAACATGATCAAAGGCAAGTCTCCAGAGGAGATTCGCAAGACCTTC 2887118 Query 1592288 AACAT 1592292 ||||| Sbjct 2887117 AACAT 2887113 >seq6 Length=3112757 Score = 136 bits (150), Expect = 5e-26 Identities = 210/300 (70%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| ||||| | |||||||| | ||||||||| || Sbjct 986277 CTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGTTTGA 986336 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | |||| ||| | ||| || | || ||| | || Sbjct 986337 TGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAATGCAATGAGCGTTGAGACC 986396 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || |||||||| | ||||||||| | || || ||||| || || |||||||| || Sbjct 986397 AATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATAGATGCCTTC 986456 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||||| ||||||||| | | ||||| || || || || || | ||||| Sbjct 986457 AATGCTGTCGGACTTCATGTCAATCAAGAAGCAGGATGACAACTGGGGTTGAGGAGTGCC 986516 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || |||| || ||||| ||| | | |||||| || ||| || Sbjct 986517 AGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGT 986576 Score = 100 bits (110), Expect = 3e-15 Identities = 323/505 (64%), Gaps = 10/505 (2%) Strand=Plus/Plus Query 1628101 ACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAA 1628160 ||||| ||||||| || | | || ||| ||||| || || || ||| | | | Sbjct 985777 ACAAAGGTGGGCAGAGCGAGGGAGGCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTA 985836 Query 1628161 AACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||| ||||||||||| || |||| | | ||||| || |||| ||||||| Sbjct 985837 TACTCGACAATCTCGGTGCAAAGATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTG 985896 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| ||| ||||||| ||||| || || | ||||||||| |||| ||| Sbjct 985897 CTCTTCTCGTTGCAGGCATCCTTGTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCC 985956 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCG-CG--CGCGGCCCTNN 1628337 ||| ||||| |||||| || | || ||||||| | || ||||||| | Sbjct 985957 TCGAGAATGGCGTACCAGAGCTTCTGGGCTTT---GACAGTCTGGCGACCGCGGCCTTCT 986013 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || || ||| || || || || || Sbjct 986014 TTCTCGTACTGTTCGTAAAGGGCTTCGAACTCCTTGCCATAAACATCAGCGAGACCAGGA 986073 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTC--GCCACCGGTCACCGCGCGGCGCATAAAGA 1628455 |||||| || || || || | ||| || | | ||| | ||| || || |||| Sbjct 986074 GCCTCGTTGGGGCAGAAAAGGGTCCAATCCTGGTTCTTCTCAACACGCTGC--ATGAAGA 986131 Query 1628456 GGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 1628515 | || |||||||| ||||| || ||||| || || || || |||||||| |||| Sbjct 986132 GATCGGGTGTCCACAGGGCGTAGAACAGGTCACGAGCACGAACTTCTTCCTTGCCATGGT 986191 Query 1628516 TCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 1628575 ||||| | |||| ||||| |||| | ||||||||||| ||||||| ||| ||||| Sbjct 986192 TCTTTCTCAGGTTCAGCCACTCGAAGACATCGGCGTGCCATGGCTCCAAGTAAATGGCAA 986251 Query 1628576 AGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| || |||||| ||| || Sbjct 986252 AGGCACCGGGCCGCTTGTTGCCTCC 986276 Score = 100 bits (110), Expect = 3e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 ||||||||||| || || || ||||| || ||| ||| ||||| || || || || Sbjct 993327 GAGGACAGCATTGGAGGGACCGTGACTTGTGTGATTCGTAACGTACCAATTGGGCTGGGA 993268 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||| ||||||||||| | || || | || || ||||||||||| || || ||| Sbjct 993267 GAGCCTTGCTTTGACAAACTTGAAGCAACACTTGCACACGCCATGCTCAGCATTCCCGCC 993208 Query 19164 ACCAAGGGATTCGAGATTGG 19183 ||||| |||||||||||||| Sbjct 993207 ACCAAAGGATTCGAGATTGG 993188 >seq3 Length=5104443 Score = 104 bits (114), Expect = 3e-16 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || || ||||| ||| |||||| |||||||||||||| | || ||||| |||||| Sbjct 4691407 TAGTCACCCACTCGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTCTCCATG 4691466 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGT-GCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||| | | |||||| || || | ||| | | | |||||| || Sbjct 4691467 AAGCTGAAGGGGTTAGTTGCGTTGTAGACGCGCTT-GTTTCCCATGGCCAGGAGCAGACG 4691525 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||||||| |||||||| ||||| ||| || |||||||||||| | || || Sbjct 4691526 GTCGGCGACGAACTCGATATACTGTTGCATCAGCTTGGCGTTCATGCCAAGAAGAGCACA 4691585 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || || | ||| ||| || ||||||||||| | |||||||| |||||| Sbjct 4691586 GGGAAGAGCATCGGTCAAGAATTCTTTCTCGATGGCAACGGCCTCAGTGATGAT 4691639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138461417853