Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 seq1 86.0 6e-12 >seq2 Length=5498963 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || |||||||| || ||||| ||| | || Sbjct 3944689 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCC 3944748 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||||||| || || || || ||||| Sbjct 3944749 GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATCAG 3944808 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || ||||| |||| ||| ||| | || || || ||| Sbjct 3944809 CAGCGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACAAC 3944868 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || ||||||||| || |||| || || Sbjct 3944869 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGG 3944915 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || || || || ||||| || | || Sbjct 3944461 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCC 3944520 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||| ||||| || || ||||| || ||| Sbjct 3944521 GACACCATCGACAATGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAA 3944580 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || || |||||||| ||||| |||||| |||| ||| ||| || | ||||||| || | Sbjct 3944581 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCG-GACTC-TGTCAGACTACA 3944638 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||| ||||| || || || || | ||| | || |||| || || Sbjct 3944639 ACATTCAGAAGGAGTCTACTCTTCATCTCGTGCTCAGACTGCGAGGTGG 3944687 >seq1 Length=6137194 Score = 86.0 bits (94), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || || || || || || || || || || | ||||||| | || | Sbjct 5194920 AAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATCGACAAT 5194861 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| |||||||| ||||| || || || || ||||||||| Sbjct 5194860 GTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCTCCGGACCAGCAGCGATTGATCTTT 5194801 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 ||||| || ||||| || ||| | | | | ||||| ||||| ||||||| Sbjct 5194800 GCCGGAAAGCAGCTCGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAAGG 5194746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897549386520