Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 102 5e-17 seq2 100 2e-16 >seq1 Length=6137194 Score = 102 bits (112), Expect = 5e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||||||| ||||| ||||| || ||| | || | || Sbjct 441137 AGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCC 441078 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || |||||||| |||||||||||||| ||||||||||| | || | ||||||||||| Sbjct 441077 TCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTGGGATGCCCTCCTTGTC 441019 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| || || ||| |||| |||| || || ||||||||||| |||| Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | || |||||||| | || || ||||| || Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGAC--AT- 5194862 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || | ||| || |||| ||| |||||||| |||||||||||||| Sbjct 5194863 -TGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTG 5194921 Query 34964 ACAAAGATCTGCAT 34977 || ||| | || || Sbjct 5194922 ACGAAGCTGTGAAT 5194935 >seq2 Length=5498963 Score = 100 bits (110), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || || || |||| || ||||||||||||||| ||||| || || | || || Sbjct 3944675 CTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCA 3944616 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| || || ||||||||||||| ||| || |||||| | || | ||||| || Sbjct 3944615 TCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTA 3944556 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938 || | || ||| ||||| || | ||||| || | |||||| || | || Sbjct 3944555 TCTTGGATCTTTGACTTGAC--AT--TGTCGATGGTGTCGGATGACTCGACTTCTAGAGT 3944500 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || ||||||||||| || ||||| ||||| Sbjct 3944499 GATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||||| ||||| ||||| ||| |||| | || Sbjct 3944444 AGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCT 3944385 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| |||||||| || || || || || | || | || ||||| || Sbjct 3944384 TCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCC 3944325 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || ||| | || | || | | ||| || || | ||| |||||| Sbjct 3944324 TGAATTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTC 3944265 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| ||||| || ||||| ||||| Sbjct 3944264 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||| |||| || | |||||||||||| || ||||| ||||| || || | || || Sbjct 3944903 CTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGACCA 3944844 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| ||| || || || ||||||| ||| ||||| || | || | ||||| ||| Sbjct 3944843 TCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCTTTG 3944784 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || ||| |||||| | || | || | ||||| || | || || Sbjct 3944783 TCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACTTCTAGAGTAATA 3944724 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || || ||||||||||| Sbjct 3944723 GTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||| || ||||| || || |||| |||| |||| Sbjct 3944216 AGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCC 3944157 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||| |||||||| || |||||||| || | || | || ||||| || Sbjct 3944156 TCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCC 3944097 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||| | || | || ||| ||| || |||| ||| |||||| Sbjct 3944096 TGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTC 3944037 Query 34946 TTTCCCGT 34953 ||||| || Sbjct 3944036 TTTCCGGT 3944029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692764275571