Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2 132 9e-26 >seq2 Length=5498963 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| ||||| ||||| || || || ||| || | | ||||||||| ||||| Sbjct 3944435 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTGC 3944376 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 |||||||| ||||| || | |||||||| ||||| || ||||||||||| ||||| || Sbjct 3944375 TTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTG 3944316 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || || || ||||| ||||| ||| || ||||| | || || ||||| || || Sbjct 3944315 GACTTAACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTTTCCGGTG 3944256 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || || ||||| Sbjct 3944255 AGAGTCTTGACGAAGATTTGCAT 3944233 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || | || || | || |||||||| || ||||| || || || || | Sbjct 3944689 TACCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTG 3944630 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| ||||| | ||||| || || ||||| | || ||||| ||||||| Sbjct 3944629 ACAGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAG 3944570 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || |||||||| ||||||| || ||||| || || || || | || | Sbjct 3944569 GAATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGA 3944510 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | ||| || ||||||||||| | ||||| || || || ||||| Sbjct 3944509 CTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | |||| |||||||| || || || || ||||| Sbjct 3944233 TACCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGC 3944174 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || || || ||||| |||||||| ||||| || | ||| ||||| |||| Sbjct 3944173 TTAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAG 3944114 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| | || ||||| ||||| || || | | || | Sbjct 3944113 GAATGCCTTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCCA 3944054 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788 | || | || || ||||| || |||| Sbjct 3944053 CCTCAAGGGTGATGGTCTTTCCGGTCA 3944027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981827086783051