Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2 138 7e-28 seq1 82.4 5e-11 >seq2 Length=5498963 Score = 138 bits (152), Expect = 7e-28 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || | ||||||||||| || |||||||| ||||| |||||||| ||||| Sbjct 3944916 ACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3944857 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || ||||||||||| || ||||| ||||| ||||||||||| | || Sbjct 3944856 AAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGG 3944797 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| || || || | || | ||| | ||||||| ||||| | Sbjct 3944796 GATACCCTCTTTGTCTTGGATCTT-TGACTTGACGTTGTCGATGGTGTCGGACGATTCGA 3944738 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || || || | ||||| || |||||||||||| Sbjct 3944737 CTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCATA 3944688 >seq1 Length=6137194 Score = 82.4 bits (90), Expect = 5e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621 ||||| |||||||||||| ||| ||||| | || || | || ||||||||||| ||| Sbjct 5194748 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATC 5194807 Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC 33681 || |||||||| || | || | ||||| ||||| || || | | |||| ||| Sbjct 5194808 AATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTT-GGACTTGACATTGTC 5194866 Query 33682 -ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | ||||||| || ||||| |||| ||||| || || || || | || || || || Sbjct 5194867 GATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 5194926 Query 33741 GATCTGCAT 33749 | | || || Sbjct 5194927 GCTGTGAAT 5194935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703963945280