Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 132 1e-25 seq1 84.2 5e-11 >seq2 Length=5498963 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || |||||||| || || |||||| | ||||| || || ||||| |||| Sbjct 3944475 CAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCCGACACCATCGACAA 3944534 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||| ||||| ||||| || ||| || ||| || || | ||||| Sbjct 3944535 TGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAACAGCGATTGATCTT 3944594 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| || |||||||||||||| ||||| || | || |||||| | ||||| ||||| Sbjct 3944595 CGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCAGACTACAACATTCAGAAGGAGTC 3944654 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||| || || | ||||| ||| Sbjct 3944655 TACTCTTCATCTCGTGCTCAGACTGCGA 3944682 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| ||||| | || || |||||||||||||| ||||| | || ||||| | || ||| Sbjct 3944682 TCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGT 3944623 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || |||||||||| ||| || ||||||||||| | || ||||| Sbjct 3944622 CCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTG 3944578 >seq1 Length=6137194 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || ||||| | || ||||| || ||||| |||| Sbjct 5194921 CAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATCGACAA 5194862 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| ||||| || ||||||||| |||||| || || | ||||| Sbjct 5194861 TGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCTCCGGACCAGCAGCGATTGATCTT 5194802 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 |||||||||||| | |||||||| | || | |||||||||| |||| || Sbjct 5194801 TGCCGGAAAGCAGCTCGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAA 5194748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820663721289