Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 150 3e-30 >seq6 Length=3112757 Score = 150 bits (166), Expect = 3e-30 Identities = 328/490 (67%), Gaps = 17/490 (3%) Strand=Plus/Minus Query 259694 CTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTTGGTCTGGCGACC 259753 ||| || | ||||| | ||| ||| ||||| |||| ||||||||| | ||| Sbjct 986750 CTCAACTCGGCCATTGTCTACGACCGTGACTTCAACTACCAATACTTTGGTTTCAAGACT 986691 Query 259754 TTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGGCCCCAGTATATG 259813 ||| | ||||||||| ||| | || | | || | ||| | || || || | Sbjct 986690 TTGGAGAGATCCTACCTGCTCAAGATTGGCAACAAAGTTGCAGAGAGACCACAACATCTT 986631 Query 259814 CTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAATGCGCTGGAGCAC 259873 ||||||||||| ||| | ||| | | || || ||||||| || || | ||| Sbjct 986630 CTCATGCGTGTGGCCGTGGGCATTCACGGCAATG---ACGTCGAGAAGGCCATTGAG--- 986577 Query 259874 GTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCT 259932 || ||| | |||||| ||| ||| ||||| ||| || |||| || || Sbjct 986576 ---------ACATACAACCTCATGTCCCAGAAGTGCTTCAC-TCATGCCTCGCCAACCCT 986527 Query 259933 CTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGC 259992 || || || ||||| || | || ||| || || ||||| || | ||||||||| | Sbjct 986526 TTTCAACGCTGGCACTCCTCAACCCCAGTTGTCATCCTGCTTCTTGATTGACATGAAGTC 986467 Query 259993 CGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGC 260052 ||| || || ||||||||||| || |||||| || || | ||||||||| | || Sbjct 986466 CGACAGCATTGAAGGCATCTATGATACTCTCAAGACCTGTGCAATGATCTCCAAGACCGC 986407 Query 260053 CGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCAC 260112 |||||| || ||| | ||| || | || ||| | ||| |||| | || || || Sbjct 986406 CGGCGGTATTGGTCTCAACGCTCATTGCATTCGTGCCACTGGCTCCTATATCGCCGGAAC 986347 Query 260113 CAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTA 260172 ||||||| || |||||||| | ||||||||| | || || ||| |||| || ||||| Sbjct 986346 CAACGGCACATCAAACGGCCTCATCCCCATGCTTAGAGTCTTCAACAACACTGCTCGCTA 986287 Query 260173 CGTCGACCAG 260182 |||||||||| Sbjct 986286 CGTCGACCAG 986277 Score = 111 bits (122), Expect = 2e-18 Identities = 297/451 (66%), Gaps = 18/451 (4%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| |||||| || ||||||||| ||| |||| || ||||||||||| || Sbjct 986276 GGAGGCAACAAGCGGCCCGGTGCCTTTGCCATTTACTTGGAGCCATGGCACGCCGATGTC 986217 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | |||||| |||| | ||||||||| ||||||| || || | | || || Sbjct 986216 TTCGAGTGGCTGAACCTGAGAAAGAACCATGGCAAGGAAGA---AGTTC---GTGCTCGT 986163 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || || || |||| ||||||||| ||| || || |||| || | | || || Sbjct 986162 GACCTGTTCTACGCCCTGTGGACACCCGATCTCTTCATGCAGCGTGTTGAGAAGAACCAG 986103 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCT-ATGGCGCGGC 262026 || ||| | || || ||||| |||||| || || || | | ||| | ||||| || Sbjct 986102 GATTGGACCCTTTTCTGCCCCAACGAGGCTCCTGGTCT-CGCTGATGTTTATGGCAAGGA 986044 Query 262027 CTTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCC 262083 || || ||||| || || || ||| ||| | Sbjct 986043 GTTCGAAGCCCTTTACGAACAGTACGAGAAAGAAGGCCGCGGTCGCCAGACTGTCAAAGC 985984 Query 262084 CGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACAT 262143 | || || || |||||| |||||| ||| ||| || | ||||||||| || || || || Sbjct 985983 C-CA-GA-AGCTCTGGTACGCCATTCTCGAGGCACAGACCGAGACCGGTACCCCTTATAT 985927 Query 262144 GGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGA 262203 | | |||||||| ||| |||| || ||||||||| |||| || || |||| |||| Sbjct 985926 GCTGTACAAGGATGCCTGCAACGAGAAGAGCAACCAGAAGAATCTTGGTACCAT--CAGA 985869 Query 262204 GGC--CAACCTGTGCACCGAGATCGTCCAGT 262232 || ||| || ||||||||||| ||| ||| Sbjct 985868 AGCTCCAATCTTTGCACCGAGATTGTCGAGT 985838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810331933458