Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 145 8e-30 seq1 111 2e-19 seq6 100 3e-16 >seq2 Length=5498963 Score = 145 bits (160), Expect = 8e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| |||||| | || || ||| |||||||| |||||||||||| || || || Sbjct 3944906 AGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGA 3944847 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | |||||||||||||| ||||| ||||||||||| || || || || ||| Sbjct 3944846 CCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCT 3944787 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || ||| ||||| ||| | |||||||||||||| || || |||||| Sbjct 3944786 TTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACTTCTAGAGTA 3944727 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | ||||| ||||| || ||||| Sbjct 3944726 ATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || ||||||||||| || ||||||||||| | Sbjct 3944459 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTC 3944400 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || ||| || || || || || || || || | |||||| ||||| || || Sbjct 3944399 AGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGA 3944340 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || |||||||| || || ||| | || ||| || ||||| Sbjct 3944339 ATGCCTTCCTTATCCTGAATTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTCCACT 3944280 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| | ||| || ||||| |||||||| Sbjct 3944279 TCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| |||| | |||||| || || || || ||||| |||||||||||||| Sbjct 3944687 CCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAC 3944628 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || | |||||| || || || ||||| ||||| || || || || Sbjct 3944627 AGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGA 3944568 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| ||||| || ||| ||||| ||| | |||||||| || || || Sbjct 3944567 ATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACT 3944508 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || | || || ||||| |||||||| Sbjct 3944507 TCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || ||||||||||| |||||||| |||| | |||| | || ||||| || || || Sbjct 3944201 GTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCCTCGAGTTGCTTTCCA 3944142 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || || | || |||||||| || || |||||||| || || || || || ||| Sbjct 3944141 GCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGACTTG 3944082 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || ||| | |||||| || ||||| || || || ||||| || ||||| Sbjct 3944081 ACATTGTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 3944029 >seq1 Length=6137194 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 ||||||| |||||||| |||| | |||| | || |||||||| || || ||||| | Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| |||||||| || || || || ||||| || ||||| || || ||||| || Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||||||| ||||| || || || ||||| || || || | || || |||| Sbjct 5194866 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 5194925 Query 134704 A 134704 | Sbjct 5194926 A 5194926 >seq6 Length=3112757 Score = 100 bits (110), Expect = 3e-16 Identities = 466/735 (63%), Gaps = 6/735 (1%) Strand=Plus/Minus Query 8232 CGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTG 8291 ||||||| |||| || | ||| ||||||| || || ||||||||||| || || || Sbjct 985968 CGCCATTCTCGAGGCACAGACCGAGACCGGTACCCCTTATATGCTGTACAAGGATGCCTG 985909 Query 8292 CAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGA 8351 ||||| || ||||| || | || | || ||||| | || |||||| ||| | || Sbjct 985908 CAACGAGAAGAGCAACCAGAAGAATCTTGGTACCATCAGAAGCTCCAATCTTTGCACCGA 985849 Query 8352 AATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411 ||||| |||| | || ||||| || || ||||| |||||||| || || | | | Sbjct 985848 GATTGTCGAGTATACTGCTCCCGATGAGGTTGCCGTCTGCAATCTTGCCTCCCTCGCTCT 985789 Query 8412 AAACGCGTTCGTTGATCGACGCTC-AAACACTTACGACTTTGAACAATTGAAAAACGCCG 8470 | | || ||||| | | |||| | |||||||||| | || | | | || Sbjct 985788 GCCCACCTTTGTTGA-CCAAGCTCGGGGCGAATACGACTTTGGTCGTCTGCACGAAGTCG 985730 Query 8471 TGCAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAG 8530 | || || | ||||| || | |||||||| ||||| | || ||| | | Sbjct 985729 TTCAGGTTGTGACCCGCAACTTGAACAAGATCATTGACGTCAACTACTACCCCGTCATTG 985670 Query 8531 AAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCG 8590 |||| | ||| | ||| | ||||||||| ||||||| |||||||| || | Sbjct 985669 AAGCACAAAACAGCAACTACAGACACCGCCCCGTTGGCTTGGGCGTTCAAGGTCTCGCGG 985610 Query 8591 ACGCGTTTGCCATG--TTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACAT 8648 | || || || || |||| || || | ||| | ||||| ||| ||||||||| Sbjct 985609 ATGCCTT--CCTTGCTCTGCGTCTACCTTTCGACTCTCCCGAAGCACGCCAGCTCAACAT 985552 Query 8649 AAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGA 8708 | || || || | || | | || | || ||| ||||| || | ||| Sbjct 985551 CCAGATCTTTGAGACCATCTACCATGCTGCTCTTACTGCATCCTGCCAACTGGCTCAAGA 985492 Query 8709 ATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGA 8768 | ||| | ||| || |||||||| | | || || || | || || || Sbjct 985491 AGAGGGTCCTTACTCTAGCTATCAAGGCAGCCCAGTCTCCCAAGGCATTCTTCAGTATGA 985432 Query 8769 CATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGC 8828 ||||||||| ||||| ||||| | | ||| ||||| | | | || |||| || Sbjct 985431 CATGTGGAACGTCACCCCCACAGATCTCTGGGATTGGGATGCTCTCAAGGCTGAAATCGC 985372 Query 8829 TCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCA 8888 | |||| | ||||| || || | || || |||||| || || |||| |||| Sbjct 985371 CAAGCACGGTGTTCGCAACTCTCTTCTCGTTGCACCCATGCCAACTGCATCGACCTCTCA 985312 Query 8889 AATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGT 8948 || | || ||||| || | ||| ||||| | |||| |||| | ||| | || || Sbjct 985311 GATCCTTGGCAACAATGAGTGCTTCGAGCCATACACCTCCAACATCTACTCTCGCCGTGT 985252 Query 8949 GTTGGCCGGCGATTT 8963 ||||| || || || Sbjct 985251 CTTGGCTGGTGAGTT 985237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398343142680