Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq6 105 6e-18 seq2 100 2e-16 >seq6 Length=3112757 Score = 105 bits (116), Expect = 6e-18 Identities = 158/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818 || ||| || |||||||||| ||| || | | ||| |||||| ||| | || || || Sbjct 985230 GACTTGGAACTCACCAGCCAAGACACGGCGAGAGTAGATGTTGGAGGTGTATGGCTCGAA 985289 Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878 | | || |||||||| | || || | || | ||| || |||||| ||| || | || Sbjct 985290 GCACTCATTGTTGCCAAGGATCTGAGAGGTCGATGCAGTTGGCATGGGTGCAACGAGAAG 985349 Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938 ||| || |||| ||||||| | | ||||| ||| | ||||||||||||| ||| Sbjct 985350 AGAGTTGCGAACACCGTGCTTGGCGATTTCAGCCTTGAGAGCATCCCAATCCCAGAGATC 985409 Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982 || || |||| ||||||||| ||| | || || ||||||| Sbjct 985410 TGTGGGGGTGAC---GTTCCACATGTCATACTGAAGAATGCCTT 985450 >seq2 Length=5498963 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| |||||||| || | || | ||||| | |||||||||| Sbjct 3944657 GTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTCCAACTGTTTACCG 3944598 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | |||||||| || || || | |||||||||||| |||||| || Sbjct 3944597 GCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTGGATCTTTGACTTG 3944538 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || ||||||||||| || | ||||| || || || Sbjct 3944537 ACATTGTCGATGGTGTCGGATGACTCGACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTC 3944478 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 3944477 TTGACGAAGATTTGCATA 3944460 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| | ||| |||||||| | || || ||||| || ||||||||| Sbjct 3944915 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3944856 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | ||||| | ||||| || || | || | ||||| ||||| || || Sbjct 3944855 AGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGG 3944796 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||| || |||||| || | | | || | ||||| | | ||| ||| Sbjct 3944795 ATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACT 3944736 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||||||| |||| ||||| ||||| ||||| || ||||| |||||| Sbjct 3944735 TCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCATA 3944688 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || |||||||| |||| | |||| ||||||| || || || || Sbjct 3944429 GTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTGCTTTCCA 3944370 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||||||||| || || | || || ||||| || ||| || Sbjct 3944369 GCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTGGACTTA 3944310 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | || ||||| || || || | || || || ||||| Sbjct 3944309 ACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTTTCCGGTGAGAGTC 3944250 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 3944249 TTGACGAAGATTTGCATA 3944232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934353390008