Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq6 221 1e-52 seq3 109 6e-19 seq2 87.8 2e-12 >seq6 Length=3112757 Score = 221 bits (244), Expect = 1e-52 Identities = 896/1386 (65%), Gaps = 43/1386 (3%) Strand=Plus/Minus Query 104235 TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACG 104294 ||||||| |||||| | || ||||| || | ||| | || | | | ||||||||| Sbjct 986629 TCATGCGTGTGGCCGTGGGCATTCACGGCAATGACGTCGAGAAGGCCATTGAGACATACA 986570 Query 104295 ACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACA 104353 || |||||||| | || |||| ||| || | |||||||| ||||| ||||| || Sbjct 986569 ACCTCATGTCCCA-GAAGTGCTTCACTCATGCCTCGCCAACCCTTTTCAACGCTGGCACT 986511 Query 104354 CCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGT 104413 || |||||| |||| |||||| | || | || ||| ||| || | || Sbjct 986510 CCTCAACCCCAGTTGTCATCCTGCTTCTTGATTGACATGAAGTCCGACAGCATTGAAGGC 986451 Query 104414 ATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATG 104473 ||||||| ||||| | | ||||| ||||| ||| || || |||||||| | Sbjct 986450 ATCTATGATACTCTCAAGACCTGTGCAATGATCTCCAAGACCGCCGGCGGTATTGGTCTC 986391 Query 104474 CACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGGA-CAAATGGTCAATCAG 104531 || ||| | | |||| | ||| ||| ||| ||| | || || |||| Sbjct 986390 AACGCTCATTGCATTCGTGCCACTGG--CTCCTATATCGCCGGAACCAACGGCACATCAA 986333 Query 104532 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTG 104591 | || | || || |||||| | || || ||| ||| || ||||| || | || | Sbjct 986332 ACGGCCTCATCCCCATGCTTAGAGTCTTCAACAACACTGCTCGCTACGTCGACCA----G 986277 Query 104592 GGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 104644 || | | | ||| || | | || | || | |||||||||||||| ||| || Sbjct 986276 GGAGGCAACAAGCGGCCCGGTGCCTTTGCCATTTACTTGGAGCCATGGCACGCCGATGTC 986217 Query 104645 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCT 104703 | |||| || | || | ||||| || | || || | || ||| || || || Sbjct 986216 TTCGAGTGGCTGAACCTGAGAAAGAACCATGGCAAGGAAGAAGTTCG-TGCTCGTGACCT 986158 Query 104704 CTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTG 104763 |||| ||| || |||| || |||||||||||| || | |||||| ||| |||| Sbjct 986157 GTTCTACGCCCTGTGGACACCCGATCTCTTCATGCAGCGTGTTGAGAAGAACCAGGATTG 986098 Query 104764 GTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGA 104823 | | || || || || || |||| ||||||||| | |||| || ||||||| || Sbjct 986097 GACCCTTTTCTGCCCCAACGAGGCTCCTGGTCTCGCTGATGTTTATGGCAAGGAGTTCGA 986038 Query 104824 AGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-GACGGTGCCAGCTGCCG 104882 |||||||||| | |||||||| ||||||| || | | | | ||| || ||| | | Sbjct 986037 AGCCCTTTACGAACAGTACGAGAAAGAAGGCCGCG-GTCGCCAGACTGTCAAAGC-CCAG 985980 Query 104883 ATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTAC 104941 | | | ||| | || |||||| || | || |||||||| ||||| || || ||||| ||| Sbjct 985979 AAGCTCTGGTACGCCATTCTCGAGGCACAGACCGAGACCGGTACCCCTTATATGCTGTAC 985920 Query 104942 AAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAAT 105001 || || ||||| ||| | ||||| || || |||||| | ||| |||| || |||||| Sbjct 985919 AAGGATGCCTGCAACGAGAAGAGCAACCAGAAGAATCTTGGTACCATCAGAAGCTCCAAT 985860 Query 105002 CTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCA 105061 || || || || || | || | ||| | |||||| || || || || || || Sbjct 985859 CTTTGCACCGAGATTGTCGAGTATACTGCTCCCGATGAGGTTGCCGTCTGCAATCTTGCC 985800 Query 105062 TCAATCGCTCTCCCCAAGTATGTGGATCCA----GAGACAAAGACATTTGATTATGAAAA 105117 || ||||||| |||| | ||| || | | | | | || || || | || Sbjct 985799 TCCCTCGCTCTGCCCACCTTTGTTGACCAAGCTCGGGGCGAATAC----GACTTTGGTCG 985744 Query 105118 ACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTT 105177 || |||||||| | ||| ||| ||| | |||| | ||||| || | Sbjct 985743 TCTGCACGAAGTCGTTCAGGTTGTGACCCGCAACTTGAACAAGATCATTGACGTCAACTA 985684 Query 105178 TTACCCCG---TTGAGACTGCTCGTAA-ATCTAATATGAGACACCGTCCAATTGGTCTCG 105233 ||||||| |||| || | || | | | || |||||||| || |||| | | Sbjct 985683 CTACCCCGTCATTGA---AGCACAAAACAGCAACTA-CAGACACCGCCCCGTTGGCTTGG 985628 Query 105234 GTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAA 105292 | ||||| ||||||||||||| ||| || || || || | | || || || |||| Sbjct 985627 GCGTTCAAGGTCTCGCGGATGCCTTCCTTGCTCTG-CGTCTACCTTTCGACTCTCCCGAA 985569 Query 105293 GCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGT 105352 || | |||| | || ||||||||||| || || || |||||| || Sbjct 985568 GCACGCCAGCTCAACATCCAGATCTTTGAGACCATCTACCATGCTGCTCTTACTGCATCC 985509 Query 105353 TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAA 105412 | | |||| | | || ||||| || | || | | || |||| || ||| Sbjct 985508 TGCCAACTGGCTCAAGAAGAGGGTCCTTACTCTAGCTATCAAGGCAGCCCAGTCTCCCAA 985449 Query 105413 GGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGACTGGGAAGC 105471 || | ||||| | ||| |||| |||| || | ||| || || || ||||| || Sbjct 985448 GGCATTCTTCAGTATGACATGT-GGAACGTCACCCCCACAGATCTCTGGGATTGGGATGC 985390 Query 105472 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCC 105531 |||||||| ||| || | ||| |||| ||| ||| ||| | || || ||||| Sbjct 985389 TCTCAAGGCTGAAATCGCCAAGCACGGTGTTCGCAACTCTCTTCTCGTTGCACCCATGCC 985330 Query 105532 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 105591 ||| || || ||| | || ||| | || || ||||| ||||| || || ||||| | || Sbjct 985329 AACTGCATCGACCTCTCAGATCCTTGGCAACAATGAGTGCTTCGAGCCATACACCTCCAA 985270 Query 105592 CATCTA 105597 |||||| Sbjct 985269 CATCTA 985264 >seq3 Length=5104443 Score = 109 bits (120), Expect = 6e-19 Identities = 208/302 (69%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 94657 GAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTC 94716 |||| |||||| ||||| |||| || || ||||| | | |||| | || Sbjct 4691993 GAGATGTACAGTTTGCTCATCGACACATACATCAAGGACCCTAAGCAAAAGACCTACCTG 4691934 Query 94717 TTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG 94776 || || ||||| | || |||| || || | ||||| || || |||||| |||| ||| Sbjct 4691933 TTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAATGG 4691874 Query 94777 TTTG-ATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGG 94835 | | | | | | ||| | |||| | |||| || | ||||| || ||||||||| Sbjct 4691873 ATCGCAGATGATGCTTCGT-CGTTTGGTCAGCGTCTGGTGGCATTCGCTGCTGTTGAGGG 4691815 Query 94836 TATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGA--GGTCTCATG 94893 ||||||||||||||| || ||| ||| || | ||| | ||| || | || || ||| Sbjct 4691814 TATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAG--GCCAAGGGACTTATG 4691757 Query 94894 CCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTT 94953 || ||| | ||||||||||||| | |||||||| |||||||| | ||| || ||| Sbjct 4691756 CCTGGTTTGACCTTCTCCAACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTTT 4691697 Query 94954 GC 94955 || Sbjct 4691696 GC 4691695 >seq2 Length=5498963 Score = 87.8 bits (96), Expect = 2e-12 Identities = 215/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 169187 CCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCT 169246 || |||| ||| ||| ||||||||||| | | |||| || ||||| | | || Sbjct 2338654 CCATCGTGATCCTGATCAGTCATGATCATCAAATGACCGTAACGAAGGCCTTGAGTGTCG 2338595 Query 169247 TGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGA-GATCGTTGAACTCT-TGGT 169304 ||| |||| ||||| ||||| | || ||||||| | || |||| ||| || Sbjct 2338594 GTGTAGACCTTCTTGTGTTGGAGACCAAGGAAATTCTTGATGTTC--TGAA-TCTCTGCA 2338538 Query 169305 TTGATGTGAGCTGTGT--GACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGG 169362 || || ||| | || |||||||||||| |||||||| |||| |||||||| || Sbjct 2338537 TTCTTG-GAGATTTGATCGACAGAGGCATCACGAACATTGAGCAACTTTCCACGAAGCGG 2338479 Query 169363 GAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGC 169422 ||| || || | |||| ||||||| ||||| |||| || | || ||| || || Sbjct 2338478 GAAAACTCCAAACAGATCCGGACCAACAACGGAACGACCTGCCATGGCAAGACCTTTGGC 2338419 Query 169423 CGAGTCACCCTCGGTGACGATGAGCGTACATTTTCCAGATTGTGCCGTACCCGCCTTGTT 169482 || ||||| || || | ||| | |||||||| || | || || || ||||| Sbjct 2338418 TGAATCACCTTCAGTAAGGATCAAGGTACATTTGTGGCCTTCTCTGGTCCCGGCTTTGTT 2338359 Query 169483 CGCATCATCCAATTTGGGA 169501 || || |||||||||| Sbjct 2338358 GGCGTCGGTCAATTTGGGA 2338340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260734383160