Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3 333 8e-86 seq2 158 4e-33 seq4 138 3e-27 seq1 89.7 2e-12 >seq3 Length=5104443 Score = 333 bits (368), Expect = 8e-86 Identities = 961/1470 (65%), Gaps = 14/1470 (1%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 ||||| |||||| ||||||| || || || ||||| | | | | |||| || | Sbjct 1048224 ATAGGTATCGATCTAGGTACAACCTACTCATGTGTCGGCATCTTCAGAGATGACCGCATT 1048165 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || ||||| || ||||| || ||| | || || || || | |||||| || || || Sbjct 1048164 GAGATCATTGCCAACGATCAGGGCAACCGCACCACCCCCTCCTTCGTTGCTTTCACAGAC 1048105 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 ||||||||| |||| |||||| ||||||| ||||||| || || || | || || Sbjct 1048104 ACTGAGCGTCTGATCGGTGATGCTGCAAAGAATCAAGTCGCCATGAACCCTCACAACACA 1048045 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTG 349439 || || ||||| |||||||| || ||| | | || | || | | | || | | Sbjct 1048044 GTCTTCGATGCCAAGCGACTGATCGGTCGCAAGTTCGCCGATGCTGAGGTTCAGG--CCG 1047987 Query 349440 ATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 | | ||||| ||||| || | || || || | ||| || || | |||||| Sbjct 1047986 ACATGAAACACTTTCCCTTCAAGGTCATTGACAAGGCCGGC---AAGCCCGTCGTTGAGG 1047930 Query 349500 TTGAATATAAAGGTGAA-CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558 |||||| || || ||| | || ||| || |||||||||||| || || ||| | | Sbjct 1047929 TTGAATTCAAGGGCGAAACCAAGACA-TTCACACCCGAAGAAATCTCTTCGATGATCCTG 1047871 Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618 || ||| || | ||| || ||||| | |||| || || | | || ||| | Sbjct 1047870 ACCAAGATGCGAGAGACTGCCGAGTCATATCTTGGTGGCACCGTCAACAACGCAGTTGTC 1047811 Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 || || || ||||| || || || | |||||| || || || ||||| || |||| Sbjct 1047810 ACAGTTCCTGCCTACTTCAACGACTCTCAGCGTCAAGCCACCAAGGATGCCGGTCTCATT 1047751 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | ||||| || | || || || |||||||||||||| || ||||| || || Sbjct 1047750 GCTGGTCTTAATGTCCTCCGTATCATCAACGAACCCACTGCTGCCGCTATTGCCTACGGC 1047691 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || || | || ||| || ||| |||| || || ||| | ||||||||||| Sbjct 1047690 CTCGACAAGAAGACTGAGGGTGAGCGGAATGTTCTCATCTTCGATCTTGGTGGTGGTACC 1047631 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 || ||||| || || | || |||| ||||| || || ||||| || | ||||||||| Sbjct 1047630 TTCGATGTCTCCCTCTTGACCATTGAGGAGGGCATCTTCGAAGTCAAGTCCACTGCTGGT 1047571 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918 ||||| || | ||||| |||||||| || || |||||||| || || |||| || Sbjct 1047570 GATACTCACTTGGGTGGTGAAGATTTCGACAACCGTCTCGTCAACCACTTCGTTAGCGAG 1047511 Query 349919 TTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGA 349978 |||||| | || | | ||| | | || || | || | || || || | Sbjct 1047510 TTTAAGAGAAAACATCGCAAGGATCTCAGCTCCAACGCTCGCGCCCTTCGACGTCTCCGC 1047451 Query 349979 ACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATT 350038 ||||| || |||||||| ||||| | | || || || | || |||||||| ||||| Sbjct 1047450 ACTGCTTGCGAACGTGCCAAGCGCACTCTTTCTTCGTCTGCTCAGACCTCTATCGAAATC 1047391 Query 350039 GATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAA 350098 || |||||| || |||| ||||||| | || || || ||||| || || || ||| Sbjct 1047390 GACTCTCTTTTCGAAGGCATCGATTTCTACACCTCAATCACTCGTGCCCGATTCGAGGAA 1047331 Query 350099 TTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCA 350158 | || ||| || || | | || ||||| || || || || | || || Sbjct 1047330 CTTTGCCAGGACCTCTTCCGCTCCACCATGGACCCCGTCGAGCGTGTCCTCCGCGACGCC 1047271 Query 350159 AAAATGTCCAAAAATCAG-ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCC 350217 || || | || ||| || | || | || | ||||| || ||||| ||||| || Sbjct 1047270 AAGAT-TGACAAGTCCAGCGTTCACGAGATCGTCCTCGTTGGAGGCTCTACCCGTATCCC 1047212 Query 350218 AAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAA 350277 | | || || | | ||||| || || || ||||| || || | || || || Sbjct 1047211 ACGTATCCAGAAGCTTGTCTCTGACTTCTTCAACGGCAAGGAGCCCAACAAGTCCATCAA 1047152 Query 350278 TCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAA 350337 || ||||| |||||||| || ||||| ||||| || ||| | ||| | || ||| ||| Sbjct 1047151 CCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAAGCAGCCATTCTTTCCGGAGATAC 1047092 Query 350338 GAGTTCTAAA---ATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATT 350394 || ||| | | || | | || | ||||| | ||||| || | || | Sbjct 1047091 TTCCTCGAAATCTACCAACGAAATCCTTCTCTTGGATGTTGCCCCACTGTCTGTCGGTAT 1047032 Query 350395 AGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAA 350454 || ||| |||| | || ||||| | || || |||| | ||||| || || || Sbjct 1047031 TGAGACTGCTGGAGGTGTCATGACCGCACTCATCAAGCGAAACACCACTGTTCCAACCAA 1046972 Query 350455 AAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATT 350514 |||||| | || || ||||| || | || || || || | || || ||||| | Sbjct 1046971 GAAGTCCGAGACCTTCTCTACCTTCTCCGACAACCAACCTGGTGTGCTTATCCAAGTTTA 1046912 Query 350515 TGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGA 350574 || ||||| ||||| ||||| || || || || || || | || | || Sbjct 1046911 CGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTTCTCGGCAAGTTCGAATTGTCTGG 1046852 Query 350575 AATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAA 350634 || ||||| ||| | || |||||||| || || || | |||||| ||||| | || Sbjct 1046851 CATCCCACCTGCTCCTCGTGGTGTTCCTCAAATCGAGGTTACCTTCGATGTTGATGCCAA 1046792 Query 350635 TGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 ||||| | |||||| | || ||||| || Sbjct 1046791 CGGTATCATGAATGTTTCTGCGGTTGAGAA 1046762 Score = 87.8 bits (96), Expect = 5e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 183635 ATGTTTTCTTTTAAATTCAGTAATAAAATG-TTGAAGTAATCTTGTATCAAAATCTTCAC 183693 ||||||||| ||||| || ||| || || |||| | | | | || |||||||||| Sbjct 1047496 ATGTTTTCTCTTAAACTCGCTAACGAAGTGGTTGACGAGACGGT-TGTCGAAATCTTCAC 1047554 Query 183694 CACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTA 183753 |||| || || ||||| |||||||| | || ||||| || || || || ||||| | | Sbjct 1047555 CACCCAAGTGAGTATCACCAGCAGTGGACTTGACTTCGAAGATGCCCTCCTCAATGGTCA 1047614 Query 183754 AAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | | || ||||| || ||||||||||| | ||| || Sbjct 1047615 AGAGGGAGACATCGAAGGTACCACCACCAAGATCGAA 1047651 >seq2 Length=5498963 Score = 158 bits (174), Expect = 4e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || ||||| ||||| || || || || || || | Sbjct 3944467 TTTGCATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGT 3944408 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | ||| | || || || ||||||||||| |||||||| ||||| ||||| || |||| Sbjct 3944407 AGTCACTCAGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGAT 3944348 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| |||||||||||||| | || || || ||||| | ||| | Sbjct 3944347 CAGGAGGAATGCCTTCCTTATCCTGAATTTTGGACTTAACGTTGTCAATGGTATCGCTAG 3944288 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || | ||||||||||| || || || || || || ||||| Sbjct 3944287 ACTCCACTTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 150 bits (166), Expect = 5e-31 Identities = 162/212 (76%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || |||||||| | ||||| || ||||| || || | Sbjct 3944239 TTTGCATACCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGT 3944180 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || || || ||||| || ||||| |||||||| ||||| || |||||||||| Sbjct 3944179 AATCGCTTAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGAT 3944120 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||||||||| ||||| |||||||| || || | || ||||| ||||| | || | || Sbjct 3944119 CAGGAGGAATGCCTTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTC-GCTG 3944061 Query 140683 GT-TCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || ||||| || | ||||||||||| Sbjct 3944060 GACTCCACCTCAAGGGTGATGGTCTTTCCGGT 3944029 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | ||| || || ||||||||||||||||| || ||||| || || || Sbjct 3944691 CATACCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTC 3944632 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| | ||||| || || ||||| | || || || || || Sbjct 3944631 TGACAGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGG 3944572 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || |||||||| || || || | || ||||| || || | || |||| || Sbjct 3944571 AGGAATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTC 3944512 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | |||||| || || || || || || || || ||||| Sbjct 3944511 GACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 131 bits (144), Expect = 5e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||||| ||||||||| | ||| | || | ||| || || ||| ||||| || || | Sbjct 3944923 TTTACTGACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGT 3944864 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | ||||| |||||||| | |||||| || |||||||| | || ||||||| Sbjct 3944863 AGTCGGAAAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGAT 3944804 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| || || || ||||| || || || || | || || || || || | || || | Sbjct 3944803 CAGGTGGGATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACG 3944744 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || |||| ||||| || || || ||||| || || |||||||| Sbjct 3944743 ATTCGACTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 >seq4 Length=4953330 Score = 138 bits (152), Expect = 3e-27 Identities = 249/363 (69%), Gaps = 2/363 (1%) Strand=Plus/Plus Query 349528 TTTACCC--GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585 ||||||| ||||| |||| | |||||||| | || ||||||||| | || || || Sbjct 3436406 TTTACCCCTGAAGAGGTTTCGGCCATGGTTTTGGGCAAGATGAAGGAAGTCGCAGAGTCA 3436465 Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645 || | || | | ||| || | || || | || || ||||||||||| || || | Sbjct 3436466 TACCTTGGCAAGAAAGTCACCCACGCCGTCGTCACCGTCCCAGCCTATTTCAACGACAAC 3436525 Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705 ||||| || ||||| |||||||| || || || || | |||||| | | | Sbjct 3436526 CAGCGACAGGCTACAAAGGATGCTGGTGTGATCGCAGGTTTGACTGTTCTCCGCGTCGTC 3436585 Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaa 349765 || || || || || ||||| || || ||||| || || || | || | | |||| Sbjct 3436586 AACGAGCCTACGGCCGCAGCTATCGCCTATGGACTCGACAAGACCAGCAAGAAGGAAAGC 3436645 Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 | ||| | | | ||| | |||||||| ||||| ||||| || || || || |||| Sbjct 3436646 CAAATTATCGTCTACGATCTCGGTGGTGGCACTTTCGATGTCTCTCTGCTCTCAATTGAC 3436705 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 || || |||| || || || |||||||||||||| |||||||| || |||||||| Sbjct 3436706 GACGGTGTTTTCGAGGTCCTGGCTACTGCTGGTGATACCCATCTTGGCGGTGAAGATTTC 3436765 Query 349886 GAT 349888 ||| Sbjct 3436766 GAT 3436768 >seq1 Length=6137194 Score = 89.7 bits (98), Expect = 2e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 ||||| || || ||||| | || || |||||||| || || ||||| |||||||| Sbjct 5194748 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATC 5194807 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | || ||||| || |||||||||||||| || || || || || | || ||||| || Sbjct 5194808 AATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 5194867 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || | || || | || || ||||| || | ||||| || || || || || || || Sbjct 5194868 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 5194926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254225272227