Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6 185 1e-41 seq2 179 4e-40 seq1 132 5e-26 seq3 102 9e-17 >seq6 Length=3112757 Score = 185 bits (204), Expect = 1e-41 Identities = 505/764 (66%), Gaps = 21/764 (3%) Strand=Plus/Plus Query 80905 AGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTG 80964 ||||| || |||||||| ||||| ||||| || | | | ||| ||||||| || || ||| Sbjct 985795 AGGGAGGCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTATACTCGACAATCTCGGTG 985854 Query 80965 CACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCG 81024 || | ||| || | || ||||| || || |||||||| ||| ||||||| || Sbjct 985855 CAAAGATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTGCTCTTCTCGTTGCAGGCA 985914 Query 81025 TCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAA 81084 |||||||| ||| || ||||||||||||||| ||||| || ||| ||||||| ||| Sbjct 985915 TCCTTGTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAG 985974 Query 81085 ATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCT 81144 | || | || ||||| || ||| |||||| | | |||| ||||| Sbjct 985975 AGCTTCTGGGCTTTGACAGTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGG 986034 Query 81145 TCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204 | ||||||| || | || |||| ||| | || |||||| ||||| | ||| Sbjct 986035 GCTTCGAACTCCTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGG 986094 Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264 ||| || || ||||| ||| || |||||| || || |||| |||||| | Sbjct 986095 GTCCAATCCTGGTTCTTCTCAACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAG 986154 Query 81265 AACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTC 81323 |||||||| || ||| || | || || | || ||||| | || | || | || Sbjct 986155 AACAGGTCACGAGCA-CGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGCCACTC 986213 Query 81324 CATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGAC----GGC 81379 | || || || ||||||||||||| || | ||| | | | || || | || Sbjct 986214 GAAGACATCGGCGTGCCATGGCTCCAAGTAAATGGC-AAAGGCACCGGGCCGCTTGTTGC 986272 Query 81380 CACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT 81439 | ||||||| |||||| || ||||| ||| || || | | ||| ||||||| || | Sbjct 986273 CTCCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGT 986332 Query 81440 CTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGC--TGA---T 81494 ||| ||||| || || ||||| || || |||| || | ||| ||| | Sbjct 986333 TTGATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAA---TGCAATGAGCGT 986389 Query 81495 TGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATA 81554 || ||||| || || || | ||| || ||| ||||| || | || ||||| Sbjct 986390 TG--AGACCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATA 986447 Query 81555 AATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT 81614 || || || ||||| || |||||||||| |||||| ||| ||||| || ||| | Sbjct 986448 GATGCCTTCAATGCTGTCGGACTTCATGTCAATCAAGAAGCAGGATGACAACT--GGGGT 986505 Query 81615 TTTTGA--GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAA 81656 | || ||| || ||||| || ||||| | || ||| |||| Sbjct 986506 TGAGGAGTGCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAA 986549 >seq2 Length=5498963 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| || || || || || ||||| | Sbjct 3944233 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAAGTGGAGTCTAGC 3944292 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||| | ||||||||||| ||||| || |||||||| || || Sbjct 3944293 GATACCATTGACAACGTTAAGTCCAAAATTCAGGATAAGGAAGGCATTCCTCCTGATCAA 3944352 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| |||||||| || || | ||| ||||| ||||| || Sbjct 3944353 CAGCGTCTCATCTTCGCTGGAAAGCAACTTGAAGACGGTCGCACCCTGAGTGACTACAAC 3944412 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||| ||||| ||| | || || || ||||| Sbjct 3944413 ATCCAGAAGGAATCCACTCTCCATCTCGTCCTCCGCCTCCGTGGTGG 3944459 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||| ||||| | || | ||||| ||| | ||| | Sbjct 3944029 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACCATTGACAATGTCAAGTCC 3944088 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| ||||| || |||||||| || ||||| || || || || ||||| ||| Sbjct 3944089 AAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCAACGCCTTATCTTCGCTGGAAAG 3944148 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||||| || |||||| || || || ||||||||||||| || | ||| Sbjct 3944149 CAACTCGAGGATGGCCGCACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCAT 3944208 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 3944209 CTTGTCCTTCGTCTCCGTGGTGG 3944231 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || ||||| || || |||||| Sbjct 3944461 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCC 3944520 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || || || || ||||| |||||||||||||| Sbjct 3944521 GACACCATCGACAATGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAA 3944580 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || ||||| || | || |||| ||| || || ||||||| || Sbjct 3944581 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCAGACTACAAC 3944640 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||||||||| || | | || || ||||| Sbjct 3944641 ATTCAGAAGGAGTCTACTCTTCATCTCGTGCTCAGACTGCGAGGTGG 3944687 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || ||||||||||||||||| || || || || Sbjct 3944689 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCC 3944748 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || || ||||| ||||| || || || || ||| Sbjct 3944749 GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATCAG 3944808 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || || ||| | || |||| ||| || || | ||||| || Sbjct 3944809 CAGCGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACAAC 3944868 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||||||||| ||| || ||| | || ||| | || || ||||| || Sbjct 3944869 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGGTCA 3944918 Score = 86.0 bits (94), Expect = 7e-12 Identities = 197/293 (67%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || || |||||||| ||||||||||| || ||| ||||| | ||| || || | Sbjct 2339157 GATGGGCTCAAGCCCGGTCAGCGCAAGGTCATGTACACCTGCTTTAAGCGCAATCTCAGG 2339216 Query 32044 AGTGACATGAAGGTGGC-GCAGCTGTCGGGCTACGTGGCAGAGCA-AACGGCCTATCACC 32101 | || ||||||||||| | | || || ||| ||| ||| || || ||||||| Sbjct 2339217 AAGGATATGAAGGTGGCTGAACTTGCTGGTCTAATTGG--TGGCATGACAGCATATCACC 2339274 Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161 | ||||||| || || || |||||||| | || |||| |||||| ||| ||| Sbjct 2339275 ATGGCGAGGTCTCTCTGCAACAAACCATTGTTGGTTTGGCACAGACCTTTGTGGGTTCAA 2339334 Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221 | || | || || | ||||| || |||||||| || || || ||||| | | Sbjct 2339335 ACAATGTCAATTTGTTGGAGCCCTCCGGACAGTTCGGTACTCGAAATCAAGGTGGTAGTG 2339394 Query 32222 ATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAG 32274 || | || ||| | ||||| || |||||| | | |||||| | |||||| Sbjct 2339395 ATTCCGCCAGCGCTCGTTATATTTTCACCAGATTGTCACCTTTTGCTCGCAAG 2339447 >seq1 Length=6137194 Score = 132 bits (146), Expect = 5e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||| || | ||| |||||||| || || |||||||| || || |||||||| ||||| Sbjct 5194936 AATTCACAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTC 5194877 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| | ||| | || || || |||||||| ||||||||||| ||||| Sbjct 5194876 CGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCTCCGGACCA 5194817 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| | || ||||| || ||||| ||||| |||| || ||||| ||| || || | Sbjct 5194816 GCAGCGATTGATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACCCTCAGC-GATTACA 5194758 Query 27584 ATGTCCAAAAGG 27595 | ||||||||| Sbjct 5194757 ACATCCAAAAGG 5194746 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || |||||||| ||||| || || || || |||||||||||| Sbjct 441019 GACAAGGAGGGCATCCCACCTGACCAGCAACGTCTGATCTTCGCCGGCAAGCAACTCGAG 441078 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| || || || || | ||| | Sbjct 441079 GACGGCCGAACCCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACTTGGTCCTT 441138 Query 27619 CGTCTTCGCGGTGG 27632 |||||||| ||||| Sbjct 441139 CGTCTTCGTGGTGG 441152 >seq3 Length=5104443 Score = 102 bits (112), Expect = 9e-17 Identities = 233/345 (68%), Gaps = 8/345 (2%) Strand=Plus/Minus Query 64702 TCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGG 64761 |||||||||||||||||||| | || || || ||| || || || ||||| ||||| Sbjct 4691858 TCGTCGTTTGGTCAGCGTCTGGTGGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGC 4691799 Query 64762 TCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCG 64821 |||||| | || |||||| | || ||| || ||||| ||| || | || || Sbjct 4691798 TCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGACTTATGCCTGGTTTGACCTTCTCC 4691739 Query 64822 AACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCA 64879 |||||| |||||||||| |||||||| | ||| || ||||| | ||| |||| Sbjct 4691738 AACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTTTGCCTGCTTA-TTACTTCA 4691680 Query 64880 GCCACCTCAAGGACAAACC--ATCACATGGGACTATAATTGATATAGTAAAATCGGCTGT 64937 | ||||| || |||| || | | || | | || | || | | ||| || Sbjct 4691679 G-CACCTTAACCACAAGCCAGACCCCAAGCTCATCGAA--GCCATCATCACTGAGGCCGT 4691623 Query 64938 AGAAATTGAAAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGC 64997 | || || || |||||| | || | || ||||| ||| ||| | |||||| | || Sbjct 4691622 TGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCTCTTCTTGGCATGAACGC 4691563 Query 64998 CGATAAGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCT 65042 | | |||| ||||||||||||| || || || || || ||||| Sbjct 4691562 CAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTGCT 4691518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310335840080