Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 116 2e-21 seq1 86.0 4e-12 >seq2 Length=5498963 Score = 116 bits (128), Expect = 2e-21 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34494 CAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTC 34553 |||||||||||| || |||||||||||||| ||||| || || ||||| ||||| | || Sbjct 3944901 CAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGACCATC 3944842 Query 34554 TTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||| | |||||| || ||||| || || ||||| || || || || | ||||| ||||| Sbjct 3944841 TTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCTTTGTC 3944782 Query 34614 TGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATC 34671 | |||| |||| || ||| | || ||||| || | || ||||| | || || Sbjct 3944781 TTGGATC-TTTGACTTGACGTTGTCGATGGTGTCGGACGAT-TCGACTTCTAGAGTAATA 3944724 Query 34672 GTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || | ||||| || || |||||||| Sbjct 3944723 GTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 89.7 bits (98), Expect = 3e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||| | ||| ||||| |||||| |||||||| || ||||| || || || | ||||| Sbjct 3944670 CACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTC 3944611 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | ||||||||||| || || || ||||||||||| || || | ||||| || ||| Sbjct 3944610 CAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTG 3944551 Query 34617 GATCTTT 34623 ||||||| Sbjct 3944550 GATCTTT 3944544 Score = 82.4 bits (90), Expect = 5e-11 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 |||||||||| ||||| || ||||| || || || || || ||||||||||||| Sbjct 3944436 ATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTG 3944377 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || || || || | ||||||||| || || || | || ||||| || ||| || Sbjct 3944376 CTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATC-CTGAATTT 3944318 Query 34623 TTGTTTTAACGATAAAATTGTGTCTTCGCT---CTCCACTTCCACGGTTATCGTTTTACC 34679 | | |||||| | | || || ||||| ||||||||| | ||| || || || || Sbjct 3944317 TGGACTTAACGTTGTCAATG-GT-ATCGCTAGACTCCACTTCGAGGGTGATGGTCTTTCC 3944260 Query 34680 GGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || || ||||| Sbjct 3944259 GGTGAGAGTCTTGACGAAGATTTGCAT 3944233 >seq1 Length=6137194 Score = 86.0 bits (94), Expect = 4e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | |||||| | ||||| || || || |||||| || ||||| || || | Sbjct 441154 CGCCACCACGAAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 441095 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || ||||| |||| || ||||| || ||||| || || | ||| || ||||| || | Sbjct 441094 ACAGGGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTG 441035 Query 34598 GCACTCCCTCCTTGTCT 34614 | | |||||||||||| Sbjct 441034 GGATGCCCTCCTTGTCT 441018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729565478097