Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 >seq2 Length=5498963 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || ||||| || ||||| || |||||| | || |||||| || Sbjct 3944689 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCC 3944748 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || |||| ||||| ||| || |||||||| ||| | || || | Sbjct 3944749 GACACCATCGACAAC--GTCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATC 3944806 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || ||||| || ||||||||||| || | || | | ||||| |||| Sbjct 3944807 AGCAGCGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACA 3944866 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| |||||||| |||||||||| ||| | ||||||| || Sbjct 3944867 ACATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGG 3944915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355862360966343