Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 150 4e-31 seq1 143 6e-29 seq6 129 1e-24 >seq2 Length=5498963 Score = 150 bits (166), Expect = 4e-31 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || ||||| || || || |||||||| ||||| || || ||||| || || | || ||| Sbjct 3944681 CGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTC 3944622 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||||| ||| || || |||||||| | || |||||||| ||||||| || Sbjct 3944621 CGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCC 3944562 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || || ||||||||| || || || ||||||||||| || || || || ||| Sbjct 3944561 TCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCTAGA 3944502 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | ||||| Sbjct 3944501 GTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || | || || || ||||||||||| ||||| ||||| | ||||| Sbjct 3944216 AGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCC 3944157 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || ||||||||||||||||| || |||||||||| |||||||| ||| Sbjct 3944156 TCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCC 3944097 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || |||||||| | || ||||| || ||||| ||| Sbjct 3944096 TGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTC 3944037 Query 211083 TTTCCCGT 211090 ||||| || Sbjct 3944036 TTTCCGGT 3944029 Score = 141 bits (156), Expect = 2e-28 Identities = 161/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || |||||||| || || |||||||| || || ||||| | || ||| Sbjct 3944444 AGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCT 3944385 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || |||||||| || || ||||| |||||||||| |||||||| ||| Sbjct 3944384 TCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCC 3944325 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 || || || || ||||| || ||||| || ||| || || ||||| ||||| Sbjct 3944324 TGAATTTTGGACTTAACGTTGTCAATGGTATC---GCTAGACTCCACTTCGAGGGTGATG 3944268 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||||||||| || || | ||||| Sbjct 3944267 GTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| ||||| | || | || || ||| ||| ||||||||||| || || | ||| || Sbjct 3944910 ACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGT 3944851 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| || |||||||| ||||| | || || || ||||| || | || Sbjct 3944850 TCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACC 3944791 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||||| ||||||||| || ||||| ||||||||||| || ||| || || || Sbjct 3944790 CTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACTTCTAG 3944731 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || || || || || || || | |||||| Sbjct 3944730 AGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 >seq1 Length=6137194 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| ||||| ||||| | |||||||| |||||||| || || ||||| Sbjct 5194748 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATC 5194807 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| ||||||| |||||||||||| |||||||| || || || ||| Sbjct 5194808 AATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 5194867 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| || || ||||| || ||||| ||||| |||||||| ||||| || || Sbjct 5194868 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 5194926 >seq6 Length=3112757 Score = 129 bits (142), Expect = 1e-24 Identities = 201/282 (71%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 178088 CCAAAGTTCTTTTGGTTGCTCTT-TC--TGCAAATGGCATCTTTGTAC-GCAATGAAGGG 178143 |||| ||||| ||||||||||| || |||| |||||| |||||| ||| ||||| Sbjct 985879 CCAAGATTCTTCTGGTTGCTCTTCTCGTTGCA---GGCATCCTTGTACAGCATATAAGGG 985935 Query 178144 CATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGT 178203 | || ||| | || ||| |||||||| | ||| |||| ||||||| |||||| Sbjct 985936 G-TACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAGAGCTTCTGGGCTTTGACAGT 985994 Query 178204 CTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATA 178263 || | ||||| |||||||||| || ||| || | ||||| ||| ||||| Sbjct 985995 CTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGGGCTTCGAACTCCTTGCCATA 986054 Query 178264 GACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTT 178323 |||||| ||||||| |||||||| ||||||||||| || |||| | || | || Sbjct 986055 AACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGGGTCCAATCCTGGTTCTTCTC 986114 Query 178324 CACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || | ||||||||| || | ||||| | ||| ||||| Sbjct 986115 AACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAGAA 986156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151866335285