Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2 107 1e-18 seq1 87.8 1e-12 >seq2 Length=5498963 Score = 107 bits (118), Expect = 1e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || ||||| ||||| || ||||| |||||||| || || | Sbjct 3944233 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAAGTGGAGTCTAGC 3944292 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| || |||| | |||| || || || ||||| | || || ||||| Sbjct 3944293 GATACCATTGACAACGTTAAGTCCAAAA-TTCAGGATAAGGAAGGCATTCCTCCTGATCA 3944351 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || || || || || ||||| ||||||| ||||| | | || ||||| Sbjct 3944352 ACAGCGTCTCATCTTCGCTGGAAAGCAACTTGAAGACGGTCGCACCCTGAGTGACTACAA 3944411 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || ||||| Sbjct 3944412 CATCCAGAAGGAATCCAC 3944429 >seq1 Length=6137194 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679 ||||| || ||||||||||| || || ||||| || || || || || | ||||| | Sbjct 5194926 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATC 5194867 Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738 || ||| | || | || | | ||||| ||||| | || || || || ||||| || Sbjct 5194866 GACAATGTCAAGTCCAAGA-TCCAAGACAAGGAAGGAATTCCTCCGGACCAGCAGCGATT 5194808 Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798 || |||||||| || || || ||||| | ||||| | ||||||||||||| ||||| Sbjct 5194807 GATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAA 5194748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009562924572