Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 136 9e-27 seq1 116 9e-21 seq6 87.8 4e-12 >seq2 Length=5498963 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || ||||||||||||||||| || || |||||||| || | | ||| | Sbjct 3944678 AGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGA 3944619 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | ||| ||||||||||| | | ||| ||||| | | || || || Sbjct 3944618 CCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCT 3944559 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || ||| |||||| | || | | |||| || ||| ||||| ||||| Sbjct 3944558 TTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCTAGAGTG 3944499 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| ||||||| ||||| Sbjct 3944498 ATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | || | ||| || || ||| |||||||||||||| |||| | ||||| Sbjct 3944906 AGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGA 3944847 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | ||| || || ||||| | | |||||| || | | ||| || || Sbjct 3944846 CCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCT 3944787 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || ||| ||||| | || | | |||| || || ||||| |||||| Sbjct 3944786 TTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACTTCTAGAGTA 3944727 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| || || || || ||||||| |||||| Sbjct 3944726 ATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 96.9 bits (106), Expect = 8e-15 Identities = 155/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| || || || ||||||||||| || | || | Sbjct 3944451 GAGGCGGAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCG 3944392 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || ||||| || |||||||| || | ||| || || | | || ||| Sbjct 3944391 ACCGTCTTCAAGTTGCTTT--CCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCT 3944334 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || |||||||| || || | || | | | || | ||| ||||| || Sbjct 3944333 TCCTTATCCTGAATTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGG 3944274 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || ||||||||||| ||||||| ||||| Sbjct 3944273 GTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/192 (71%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| | ||||| || |||||||||||||||||| || || | ||||| Sbjct 3944216 AGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCC 3944157 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || ||||||||||| | ||||| || | | || |||||||| | Sbjct 3944156 TCGAGTTGCTTT--CCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTAT 3944099 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAAT 152068 | || || || |||||| | || | | ||| ||| | ||| || ||||| || || Sbjct 3944098 CCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGA--CTCCACCTCAAGGGTGAT 3944041 Query 152069 AGTTTTGCCCGT 152080 || || || || Sbjct 3944040 GGTCTTTCCGGT 3944029 >seq1 Length=6137194 Score = 116 bits (128), Expect = 9e-21 Identities = 136/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 |||||||||||||||||| | || | |||||||| || ||||| ||||| |||| Sbjct 5194748 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTT--CCGGCAAAGA 5194805 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | | ||||||||||| | ||||||||||| ||||| || || |||||| | | Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||| || ||| || ||||| || || || ||||||||||| ||||| |||| Sbjct 5194866 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 5194925 Query 152095 AG 152096 || Sbjct 5194926 AG 5194927 >seq6 Length=3112757 Score = 87.8 bits (96), Expect = 4e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACG-GAATGTG 115687 ||||| ||| | |||||| | ||||| || ||| |||| || || ||| | || || Sbjct 986156 TTCTACGCCCTGTGGACACCCGATCTCTTCATGCAGCGTGTTGAGAAGAACCAGGAT-TG 986098 Query 115688 GAGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGA 115747 || ||| || || ||||| || || |||||||| | |||||||||||| ||||| || Sbjct 986097 GACCCTTTTCTGCCCCAACGAGGCTCCTGGTCTCGCTGATGTTTATGGCAAGGAGTTCGA 986038 Query 115748 GAATCTTTACGAAAGGTACGAGAAAGAGGG 115777 ||||||||| |||||||||||| || Sbjct 986037 AGCCCTTTACGAACAGTACGAGAAAGAAGG 986008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820666950039