Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 141 7e-29 seq1 138 8e-28 >seq2 Length=5498963 Score = 141 bits (156), Expect = 7e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC- 44169 || || | |||||||||||||| || || ||||||||||||||||||||||| |||| Sbjct 3944915 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3944856 Query 44170 -GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 ||||| || | || |||| || || || ||||||||||| ||||||||||| | | Sbjct 3944855 AGAGTT--CGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTG 3944798 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | ||| || || || ||||| ||| | | | |||||||||| ||||| | Sbjct 3944797 GGATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGA 3944738 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | ||||| ||||| || || ||||| || |||||||| ||||| Sbjct 3944737 CTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 127 bits (140), Expect = 1e-24 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| |||||| | ||| || ||||| || |||||| || |||||||| || Sbjct 3944691 CATACCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTC 3944632 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || || | || |||| ||| || ||||| |||||||| ||||| || |||| Sbjct 3944631 TGACAGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGG 3944572 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284 ||| | ||| || || || ||||| ||| || ||| | |||||||||| || Sbjct 3944571 AGGAATACCCTCTTTATCTTGGATCTTTGACTTGACATTGT--CGATGGTGTCGGATGAC 3944514 Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || | || || ||||| || ||||||||||| |||||||||||||| Sbjct 3944513 TCGACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| ||||| ||||||||||| || || ||| |||| || Sbjct 3944441 ACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCA 3944382 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || || ||||| | |||||| ||||| | ||| | |||||||| ||| Sbjct 3944381 AGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCCTGA 3944322 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||| || ||| | ||||| ||| || ||||| || | || || ||||| Sbjct 3944321 ATTTTGGACTT-AACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTT 3944263 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||| |||||||||||||| Sbjct 3944262 TCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 93.3 bits (102), Expect = 3e-14 Identities = 123/169 (73%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||||||||||||||||||| || ||| | || || || ||||| || || ||| Sbjct 3944195 TCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAG 3944136 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264 || | || |||||||| | ||| | |||||||| ||| ||||| ||| || || Sbjct 3944135 ATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGACTTGACATTG 3944076 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGT 44313 | | ||||||||| ||| |||||||| | || || |||||||| || Sbjct 3944075 T--CAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 3944029 >seq1 Length=6137194 Score = 138 bits (152), Expect = 8e-28 Identities = 147/192 (77%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||||||||||||||||||| ||| ||| | || || |||||||| |||||||||| Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 |||| |||||||| || | ||| | |||||||| || ||||| ||| || ||| Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||||| || |||||||| | || || ||||| |||||||||||||| || Sbjct 5194866 --CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 5194923 Query 44326 GAAGATTTGCAT 44337 |||| | || || Sbjct 5194924 GAAGCTGTGAAT 5194935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990360513553