Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq1 156 1e-32 seq2 145 2e-29 >seq1 Length=6137194 Score = 156 bits (172), Expect = 1e-32 Identities = 142/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||| |||||||| || ||||||||| Sbjct 5194926 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATC 5194867 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| || ||||| |||||||| |||||||||||||| ||| | Sbjct 5194866 GACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCTCCGGACCAGCAGCGATTG 5194807 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| |||||||| |||||||||||||| | || || |||||| ||| ||||||| Sbjct 5194806 ATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAA 5194748 >seq2 Length=5498963 Score = 145 bits (160), Expect = 2e-29 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || ||||| || |||||||| |||||||| | |||||||| || || ||||| Sbjct 3944029 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACCATTGACAATGTCAAGTCC 3944088 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| ||||| || ||||| || ||||| || |||||||| ||||||||||| ||||| Sbjct 3944089 AAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCAACGCCTTATCTTCGCTGGAAAG 3944148 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || ||||| ||||| | || || |||||| ||| ||||||| ||||| || ||||| Sbjct 3944149 CAACTCGAGGATGGCCGCACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCAT 3944208 Query 178125 CTTGT 178129 ||||| Sbjct 3944209 CTTGT 3944213 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || |||||||| || || ||||| || || || || || ||| Sbjct 3944464 CAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCCGAC 3944523 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||| || || ||||| || || ||||| ||||| || Sbjct 3944524 ACCATCGACAATGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAACAG 3944583 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| |||||| | |||||||| ||||||| | || || ||| | Sbjct 3944584 CGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCAGACTACAACATT 3944643 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || || ||||| || | ||||| Sbjct 3944644 CAGAAGGAGTCTACTCTTCATCTCGTGCTCAGACT 3944678 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || || || || || || || ||| || ||| Sbjct 3944692 CAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCCGAC 3944751 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||| || |||||||| || ||||| || || ||||| Sbjct 3944752 ACCATCGACAACGTCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATCAGCAG 3944811 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| || || ||||| | |||||||| | |||||| |||| || ||| || Sbjct 3944812 CGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACAACATC 3944871 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || |||||| | || |||||||| Sbjct 3944872 CAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACT 3944906 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCA 177980 ||||| ||||| || |||||||| ||||| || ||||||||||| ||||| ||| Sbjct 3944236 CAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAAGTGGAGTCTAGC--- 3944292 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || ||||| || ||||| || || |||||||| || ||||| || ||||| || || Sbjct 3944293 GATACCATTGACAACGTTAAGTCCAAAATTCAGGATAAGGAAGGCATTCCTCCTGATCAA 3944352 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || |||||||| ||||| || || ||||| || | || || || || ||| Sbjct 3944353 CAGCGTCTCATCTTCGCTGGAAAGCAACTTGAAGACGGTCGCACCCTGAGTGACTACAAC 3944412 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || ||||| || || ||||| || Sbjct 3944413 ATCCAGAAGGAATCCACTCTCCATCTCGT 3944441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731061194746