Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 seq2 98.7 9e-16 >seq1 Length=6137194 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | |||| ||||| || ||||||||| ||||| ||||| | Sbjct 441154 CGCCACCACGAAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 441095 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | ||||| || |||| ||||| |||||||||||||| ||||| || || ||||| | | Sbjct 441094 ACAGGGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTG 441035 Query 41754 GAACGCTCTCCTTGTC 41769 | | || ||||||||| Sbjct 441034 GGATGCCCTCCTTGTC 441019 Score = 100 bits (110), Expect = 3e-16 Identities = 133/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||| || ||||| || ||| ||||||||| | || ||||||||||| ||||| || | Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| ||||| ||||||| |||| | |||||||| ||| || ||| || | Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||||| |||||||||||| | || || || || ||||| || ||||| || Sbjct 5194866 CG--ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 5194923 Query 41851 GAA 41853 ||| Sbjct 5194924 GAA 5194926 >seq2 Length=5498963 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| |||||| ||||||||||| || ||||| |||||||| || || || | || Sbjct 3944900 AACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGACCATCT 3944841 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | || ||||| || || |||| ||||| || || | || | | ||| ||||| Sbjct 3944840 TCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCTTTGTCT 3944781 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| ||| ||| ||| | | | |||||| ||| || || || | || || || Sbjct 3944780 TGGATCTTTGACTT-GACGTTGTCGATGGTGTCGGACGATTCGACTTCTAGAGTAATAGT 3944722 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| || || ||||| |||||||| Sbjct 3944721 CTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| ||||| || || ||||||||||||||| ||||| || || || || | || || Sbjct 3944670 CACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTC 3944611 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 | ||| || |||||||| |||| ||||||||||| | |||| | ||| || || Sbjct 3944610 CAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTG 3944551 Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| ||| ||| || | || | |||||| ||||| || || | || || || Sbjct 3944550 GATCTTTGACTTGACATTGTCG--ATGGTGTCGGATGACTCGACTTCTAGAGTGATTGTC 3944493 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| || ||||| Sbjct 3944492 TTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303947990800