Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq2 104 2e-17
seq1 104 2e-17
seq3 89.7 4e-13
seq4 87.8 2e-12
>seq2
Length=4294494
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 7/229 (3%)
Strand=Plus/Plus
Query 134118 TGATTGTTCTTTACGCGTTTCATGAATAGATCGGGAATCCACAGGCCGAGCATTAAA--T 134175
|| || |||| || || |||||||| ||||| ||| ||||||| || | | ||| |
Sbjct 1336749 TGGTTCTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAG--CGCGTAGAAAAGGT 1336806
Query 134176 CGCGAGCTTTAGTGTCTTCGGAGCCCATGTTGCGTCTCAAGTTGAGAAACTCATAAATTT 134235
| ||||| ||||| ||| ||| ||||||||| | ||| ||| | | |
Sbjct 1336807 CACGAGCACGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAAAAGTCAAAGACAT 1336866
Query 134236 CCGGATGCCACGGCTCGATGTAGGCGGCGAGGGCACCTTTTCGCTTA---CCACCCTGGT 134292
| | |||||| ||||||| |||| ||||| ||||||| ||||| ||||||||||
Sbjct 1336867 CTGCATGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGT 1336926
Query 134293 CGACGTGACGCACCATGTTGTTGAAGACTCTCAACATATTGACGAGACC 134341
|||| | ||| | |||||||||||||||| | ||| || ||||||
Sbjct 1336927 CGACATAACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACC 1336975
>seq1
Length=4470873
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||| ||||||||||| || | |||||| ||| || | ||||| ||
Sbjct 3798046 GTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCTAATTGTTTGCCT 3797987
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| | || ||||| |||||||| |||||||||||||| ||| || ||
Sbjct 3797986 GCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTGCTCTTT 3797927
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | || ||||||| ||| | || ||||||||||| ||
Sbjct 3797926 ACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 3797867
Query 118722 TTTACAAAAATCTGCAT 118738
|| || ||||| |||||
Sbjct 3797866 TTGACGAAAATTTGCAT 3797850
Score = 96.9 bits (106), Expect = 3e-15
Identities = 91/115 (79%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || || |||||||| || ||||| ||||||| ||||| ||| || |
Sbjct 3797829 CAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCAA 3797770
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
| || ||||| ||| |||| |||||||||||||| ||||| || || ||||||||
Sbjct 3797769 GTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTC 3797715
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || |||||||||| || | || | || || || || || |||||||||||
Sbjct 3798306 TACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTG 3798247
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || || || || || || || ||| |||| | || |||||||| || |
Sbjct 3798246 AGAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGG 3798187
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||| |||||| |||||| || || | || | |||||| | | ||||
Sbjct 3798186 GGATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGA 3798127
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | |||||||| || || || || ||||| || |||||
Sbjct 3798126 CTTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||| | ||||||||| | || || ||||| |||||||| ||
Sbjct 3798533 ACCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGA 3798474
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| || || |||||| | ||| || || || |||| | ||||| || || || ||
Sbjct 3798473 CAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGG 3798414
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| |||||||||||| ||||| || || | |||| ||||||| ||| ||
Sbjct 3798413 AATACCCTCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAAC 3798354
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | || || || |||| ||| || || || ||||||||
Sbjct 3798353 TTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
>seq3
Length=4123400
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|||||||||||||| ||||| | ||| || ||||||||| || ||||| || ||||
Sbjct 1163294 TTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATC 1163235
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| || ||||| || || || || || ||||||||| || || || || | |||
Sbjct 1163234 AATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 1163175
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| |||||| | ||| ||||||| ||| | || ||||| || || || || || ||
Sbjct 1163174 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1163116
>seq4
Length=3720747
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | ||||| |||||||||||
Sbjct 362436 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 362495
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| ||| |||| ||||| ||||| ||||| || || || |||||||||||
Sbjct 362496 TTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCTTCCTTGTCTGT 362548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829643914956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |