Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 437 8e-118 seq1 120 3e-22 seq7 84.2 2e-11 >seq2 Length=4294494 Score = 437 bits (484), Expect = 8e-118 Identities = 1252/1902 (66%), Gaps = 57/1902 (3%) Strand=Plus/Plus Query 22104 TCTTG-TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162 ||||| ||||| || || || |||| | | ||| | |||| || ||||| |||||| Sbjct 1335519 TCTTGGTCCACAGTGAATTGAATGGGTTGAGTGGCAGCCATGGTTCGGAGATAGTACATG 1335578 Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222 || ||||||| |||||||||||| | ||| || || || || | || || || Sbjct 1335579 CCAGTCTTCAAACCCATCTTCCAGCCAGCAAAGTGCATAGATGTGATCTTGCCCATGGTC 1335638 Query 22223 GGCAAGTCCATG---TACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCG 22279 ||| ||| || | | |||| || ||| ||||||||| || || || || ||| Sbjct 1335639 GGC---TCCTTGAGATGGATGTTGAGAGATTGAGACTGATCGATGAAGGCACCACGGTCG 1335695 Query 22280 GCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTG 22339 || ||||| | | | ||||| |||||||| || ||||||||||| | | Sbjct 1335696 GCAGCCATCTGCAAAACATTACGCTGGCTGATTTCCCAGACAGTCTTGTACAGAGCCTTC 1335755 Query 22340 ATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT 22398 || || || || | | || | |||| | || || || | ||||| || Sbjct 1335756 ATATCATCAGGGAT-GTTGGGAATGTTCTGAATTGAGCCACCATCGGCAATGATACGGTT 1335814 Query 22399 TTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTC 22456 || || | || ||| | || | | || ||| || || | ||| ||| |||| Sbjct 1335815 CTTCATATTGTCAGACCAGAGGCCAAGGTCGACCAAGTCCTTCAACAGCCATG--GGTTG 1335872 Query 22457 ACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCG 22516 || ||||| || || || | ||| || || || || |||||||||||| | || || Sbjct 1335873 ACGACTTGGAATTCACCAGCCAATACACGTCGAGAATAGATGTTGGATGTGTATGGCTCA 1335932 Query 22517 AAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGT 22576 || |||| ||||| |||| ||||| | ||||| || || ||||| || || | || Sbjct 1335933 AAGCATTCGTTGTTACCCAAGATCTGGGAAGTCGATGCAGTAGGCATAGGAGCGACAAGA 1335992 Query 22577 AGCGAGTTTCTCAAGCCGTGCTTTGAAATTT-TACTCTTGAG--CATCGACCAGTCCCAC 22633 || ||||| | | |||||||| | ||||| | || || || |||| ||||||||| Sbjct 1335993 AGGGAGTTGCGGATACCGTGCTTAGCAATTTCTGCT-TTCAGGCCATC--CCAGTCCCAG 1336049 Query 22634 AGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC----GCGACTCGC 22689 || || || || || ||||| |||||| || ||||| | | ||| | |||| Sbjct 1336050 AGGTCAGAAGGAGTGACATT---CCACATGTCATATTGAAGGATGCCCTGTGAGACT--- 1336103 Query 22690 CGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTC 22749 |||||||| || || ||||| || | || | | | ||| || ||||| || Sbjct 1336104 -GGGCTGCCCTCATAGGTTTCATAAGTGCCTTGTTCCTTGGCGAGCTCGCAAGATGCTGT 1336162 Query 22750 CAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGA 22805 ||| ||| ||| || || ||||| ||||| | |||| | | ||| || || Sbjct 1336163 CAATGCGGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGTCTGGCTTCTGGAGA 1336222 Query 22806 CGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATAC 22865 ||| | |||| ||| | || ||| || || || | ||| || || || | || Sbjct 1336223 G----TCGAAAGGCAGACGTAGTGCCAGGAAAGCATCGGCAAGACCTTGGACACCAAGAC 1336278 Query 22866 CGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAAT 22925 ||| ||||| | | ||| || || ||||| | || || | || || Sbjct 1336279 CGACAGGTCGATGTCTCATGTTGCTGTTCTTGGCCTCAACTACGGGGTAGTAGTTGACAT 1336338 Query 22926 CGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGT 22985 |||| | |||||| ||||| || |||| || || | |||||| Sbjct 1336339 CGATGATCTTGTTCAGGTTTCGAGTGACAACTTGGGTAACCTCATGGAGGCGGCCAAAGT 1336398 Query 22986 CGTAAACGCC---CGATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATA 23042 | || |||| || || | ||||| | | || | |||||||||||||| | Sbjct 1336399 CATATTCGCCACTCGCCTGGTCGACAAAGGTCGGCAGTGCCAGGGAGGCAAGATTGCAGA 1336458 Query 23043 CGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTT- 23101 | |||||||| || || |||||||| ||||| || ||||| | || | ||| Sbjct 1336459 CAGCCACCTCATCAGGCGAAGTGTACTCGACAATCTCCGTACACAAGTT--TGAGCTTCG 1336516 Query 23102 -ATCGTGCCCAAATTGCTCTGGTTGCTTTT-TCGATTGCACGAATCCTTGTAGAGCATGT 23159 || |||||||| || |||||||||| || ||| ||||| | ||||||||| | |||| Sbjct 1336517 AATAGTGCCCAAGTTCTTCTGGTTGCTCTTCTCG-TTGCATGCATCCTTGTACAAGATGT 1336575 Query 23160 ACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAA 23219 | || ||||| ||||| ||| | ||| | ||| || ||||| |||| || | | Sbjct 1336576 AGGGTGTGCCAGTCTCAGTCTGAGCCTCAAGGATAGCATACCACAGCTTCTGGGCTTTGA 1336635 Query 23220 CACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCA 23278 | | ||| | | ||||| |||||| || | || | || || |||| || Sbjct 1336636 TGGTTTG-ACGACCACGTCCTTCCCGCTCGTATTTCTCATAGAGAGCCTCGAATTTTTCA 1336694 Query 23279 CCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTC 23337 || || ||| || || || || |||| | || || | |||| |||| || Sbjct 1336695 CCATATACA-TCAGCAAGACCAGGCGCCTCGTGAGGGCAGAAGAGAGTCCAGTCCTGGTT 1336753 Query 23338 ATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGC 23397 || ||||| || |||| |||||||| || |||| || |||||||| || || || || Sbjct 1336754 CTTCTCAACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAAAGGTCACGAGC 1336813 Query 23398 GCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATG 23457 || || || ||||||||| ||||||| |||| | ||||||||| || || || ||||| Sbjct 1336814 ACGGACTTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAAAAAGTCAAAGACATCTGCATG 1336873 Query 23458 CCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTA 23517 ||| ||||||||||| | ||| || || || || | ||| ||||| ||||| ||||| || Sbjct 1336874 CCATGGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATA 1336933 Query 23518 ACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTAC 23577 |||||| ||||||||| | ||||| ||||| || | |||||| ||||| | || Sbjct 1336934 ACGGGCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGT 1336993 Query 23578 GCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCC 23637 ||| || | || || | || |||| | |||| | | || ||| || || || | Sbjct 1336994 GCCGGCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGAGACCAATACCGCCAGC 1337053 Query 23638 CGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC 23697 | || || ||||| || || || || ||||| ||||| || || ||||||||||| Sbjct 1337054 GGTCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTC 1337113 Query 23698 TTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAG 23757 || | | | ||||| || ||||||| ||| | | ||||| | || |||||| Sbjct 1337114 CTTCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAG 1337173 Query 23758 TGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGC 23817 || || |||||| |||||| | | ||||| || ||||| || |||||||| Sbjct 1337174 CGTAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGCCTT 1337233 Query 23818 ATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTC--TC 23875 |||| ||| || || || ||||||| | || ||||||| ||||| ||| |||| || Sbjct 1337234 CTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTC 1337293 Query 23876 TCGACCGTG-ACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934 | | || |||| || |||| || |||||| |||| || ||| || || ||||| Sbjct 1337294 AGCAACTTGCTTGCCG---ATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAA 1337350 Query 23935 ATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || | ||||| ||||| || || | || |||||||| || Sbjct 1337351 GTATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTT 1337392 >seq1 Length=4470873 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| ||||| ||||| || |||||| |||| |||||| |||| Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909 Query 31253 GACAGTGTCGAAACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | || ||| || | || ||||||||| ||| | || |||||||| Sbjct 3797910 GATACCATCGACAATGT-AAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCA 3797968 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || | || || || |||||||| || ||||| ||| | || || || Sbjct 3797969 GCAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAA 3798028 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| ||||| || || ||||| || || || | || | ||||||| Sbjct 3798029 CATTCAGAAAGAGTCCACCCTTCACCTTGTCCTCCGTCTTCGCGGCGGTA 3798078 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || |||||||| ||||| | || || ||| | || Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||||| || || | || || || ||| Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||| ||||| || | |||||| | ||| | ||||| ||| Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||||||||| || || ||| | | || |||| Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGGTA 3798306 >seq7 Length=2329771 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/170 (71%), Gaps = 3/170 (2%) Strand=Plus/Minus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 ||||| ||||||||||| || ||||| | ||||||||| || ||||| |||||||| Sbjct 254871 TACAAGAAGGCAGAAGCCAGCTTCTGGACTGCCGAAGAAGTTGATCTGTCAAAGGATCTT 254812 Query 57642 AGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCG 57698 || ||| | | ||||| || |||||| | || | ||||| |||| Sbjct 254811 CATGACTGGCACAACCGACTCAACGACGACGAGAGATACTTCGTCTCCCACGTCCTGGCT 254752 Query 57699 TTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATT 57748 || || ||||| ||||||||||| ||||| ||||| || |||| |||| Sbjct 254751 TTCTTTGCCGCTTCCGATGGTATCGTTAATGAGAACCTGCTCGAGCGATT 254702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765603192560