Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq2 199 5e-46
>seq2
Length=4294494
Score = 199 bits (220), Expect = 5e-46
Identities = 439/648 (68%), Gaps = 14/648 (2%)
Strand=Plus/Plus
Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTTGTTCTATG 63325
|| || ||||| || ||||||||| |||| || || || ||| || || | | |
Sbjct 1336761 ACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAA-AGGTCACGAGCACGGAC 1336819
Query 63326 TTCCTCGTTTCCTGTATTCTTTTT-AAGATCGAGGAACGCCATA-ATATCAGAATGCCAC 63383
||| || || || |||||| | ||| || | || | || | | ||| | ||||||
Sbjct 1336820 TTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAA--AAAGTCAAAGACATCTGCATGCCAT 1336877
Query 63384 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63443
|| || | ||| ||||| | | || || || ||||| || ||||| || | || |
Sbjct 1336878 GGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATAACGG 1336937
Query 63444 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63503
|| ||||| || | ||||| | |||||| || | ||| || || | |||||||| |||
Sbjct 1336938 GCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCG 1336997
Query 63504 GAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCA 63561
| || || ||| | |||||||| | | ||||| |||| || || || ||
Sbjct 1336998 GCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGA--GACCAATACCGCCAGCGG 1337055
Query 63562 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGA 63621
| || ||||| | || || || | ||||||||||| ||||| ||||| || ||
Sbjct 1337056 TCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCT 1337115
Query 63622 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGG 63681
|||||| || || || || ||||| ||| | ||| ||||| ||||| || | |
Sbjct 1337116 TCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCG 1337175
Query 63682 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63741
||||||| ||||| ||||| || || | ||| | || ||||| ||||| || || |
Sbjct 1337176 TAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGC--CTT 1337233
Query 63742 CTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63799
|| | ||| | |||||| || || | |||||||| | |||||| || |||| |||
Sbjct 1337234 CTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTC 1337293
Query 63800 AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63859
| ||| || ||| || || | ||| || ||| |||||| || || || ||||| ||
Sbjct 1337294 AGCAACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAAGTA 1337353
Query 63860 GTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907
| ||| |||||||| || || | ||| |||| ||||||| |||
Sbjct 1337354 TTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATC 1337401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816474201040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |