Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2 199 5e-46 >seq2 Length=4294494 Score = 199 bits (220), Expect = 5e-46 Identities = 439/648 (68%), Gaps = 14/648 (2%) Strand=Plus/Plus Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTTGTTCTATG 63325 || || ||||| || ||||||||| |||| || || || ||| || || | | | Sbjct 1336761 ACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAA-AGGTCACGAGCACGGAC 1336819 Query 63326 TTCCTCGTTTCCTGTATTCTTTTT-AAGATCGAGGAACGCCATA-ATATCAGAATGCCAC 63383 ||| || || || |||||| | ||| || | || | || | | ||| | |||||| Sbjct 1336820 TTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAA--AAAGTCAAAGACATCTGCATGCCAT 1336877 Query 63384 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63443 || || | ||| ||||| | | || || || ||||| || ||||| || | || | Sbjct 1336878 GGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATAACGG 1336937 Query 63444 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63503 || ||||| || | ||||| | |||||| || | ||| || || | |||||||| ||| Sbjct 1336938 GCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCG 1336997 Query 63504 GAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCA 63561 | || || ||| | |||||||| | | ||||| |||| || || || || Sbjct 1336998 GCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGA--GACCAATACCGCCAGCGG 1337055 Query 63562 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGA 63621 | || ||||| | || || || | ||||||||||| ||||| ||||| || || Sbjct 1337056 TCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCT 1337115 Query 63622 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGG 63681 |||||| || || || || ||||| ||| | ||| ||||| ||||| || | | Sbjct 1337116 TCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCG 1337175 Query 63682 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63741 ||||||| ||||| ||||| || || | ||| | || ||||| ||||| || || | Sbjct 1337176 TAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGC--CTT 1337233 Query 63742 CTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63799 || | ||| | |||||| || || | |||||||| | |||||| || |||| ||| Sbjct 1337234 CTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTC 1337293 Query 63800 AACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATA 63859 | ||| || ||| || || | ||| || ||| |||||| || || || ||||| || Sbjct 1337294 AGCAACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAAGTA 1337353 Query 63860 GTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATC 63907 | ||| |||||||| || || | ||| |||| ||||||| ||| Sbjct 1337354 TTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATC 1337401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816474201040