Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 8e-28
>seq1
Length=4470873
Score = 138 bits (152), Expect = 8e-28
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||||||||| ||||| || |||||||| || ||| | | | ||||||||||||
Sbjct 3798052 TGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCTAATTGT 3797993
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
||||| || | ||||| ||||| |||||| ||||| || || ||||| ||| |||
Sbjct 3797992 TTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTG 3797933
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||||||||| | || |||||||| ||| || || | ||| ||||| || || |||
Sbjct 3797932 CTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGTC 3797873
Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364
|| || || || ||||||||||||
Sbjct 3797872 AGGGTCTTGACGAAAATTTGCATA 3797849
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||||| ||||| | || | |||||| ||||| || || || |||||||||||
Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| ||| ||||||||| ||| ||||| ||| | ||||| ||||| || || ||
Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || |||||||| |||||||||||| ||| | || ||||| || ||| ||
Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACT 3798125
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | || || ||||| || || || || || ||||| |||||||||
Sbjct 3798124 TCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCATA 3798077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362178568789563
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |