Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 154 2e-33 seq2 143 4e-30 >seq3 Length=4123400 Score = 154 bits (170), Expect = 2e-33 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||| | |||| ||||| || ||||| || || ||||||||||| || || Sbjct 2758518 GCCAAGCGTCATCGAAAGATC-CTTCGTGACAACATTCAGGGTATCACCAAGCCTGCCAT 2758460 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| || |||||| |||||| || |||| ||||||| Sbjct 2758459 CCGACGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCTGCCATGATCTACGAAGAGAC 2758400 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | ||| |||||| | | || |||| ||||||| || ||| || || Sbjct 2758399 CCGTGGTGTCCTCAAGTCTTTCCTCGAATCAGTCATCCGTGATGCTGTCACCTACACTGA 2758340 Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638 |||||| || | ||||| ||||| || Sbjct 2758339 GCACGCAAAGAGAAAGACCGTCACTTC 2758313 >seq2 Length=4294494 Score = 143 bits (158), Expect = 4e-30 Identities = 143/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| || || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 2197753 GCTAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 2197695 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||| |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 2197694 CCGACGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 2197635 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| ||||||| |||||| || || |||| ||||||| || || || || Sbjct 2197634 CCGTGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATCCGTGATGCTGTCACATACACTGA 2197575 Query 16612 GCA 16614 ||| Sbjct 2197574 GCA 2197572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075069254099