Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 2e-33
seq2 143 4e-30
>seq3
Length=4123400
Score = 154 bits (170), Expect = 2e-33
Identities = 160/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||| | |||| ||||| || ||||| || || ||||||||||| || ||
Sbjct 2758518 GCCAAGCGTCATCGAAAGATC-CTTCGTGACAACATTCAGGGTATCACCAAGCCTGCCAT 2758460
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| |||||||||||||| || |||||| |||||| || |||| |||||||
Sbjct 2758459 CCGACGTCTCGCTCGTCGTGGTGGTGTGAAGCGTATCTCTGCCATGATCTACGAAGAGAC 2758400
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | ||| |||||| | | || |||| ||||||| || ||| || ||
Sbjct 2758399 CCGTGGTGTCCTCAAGTCTTTCCTCGAATCAGTCATCCGTGATGCTGTCACCTACACTGA 2758340
Query 16612 GCACGCTAAACGTAAGACTGTCACCTC 16638
|||||| || | ||||| ||||| ||
Sbjct 2758339 GCACGCAAAGAGAAAGACCGTCACTTC 2758313
>seq2
Length=4294494
Score = 143 bits (158), Expect = 4e-30
Identities = 143/183 (78%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||| || || | ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 2197753 GCTAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 2197695
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| ||||| |||||||| ||||||||| |||| | || |||| |||||||
Sbjct 2197694 CCGACGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAAGAGAC 2197635
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| ||||||| |||||| || || |||| ||||||| || || || ||
Sbjct 2197634 CCGTGGTGTCTTGAAGACCTTCCTTGAGGGTGTCATCCGTGATGCTGTCACATACACTGA 2197575
Query 16612 GCA 16614
|||
Sbjct 2197574 GCA 2197572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075069254099
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |