Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq2 192 7e-44
>seq2
Length=4294494
Score = 192 bits (212), Expect = 7e-44
Identities = 548/826 (66%), Gaps = 20/826 (2%)
Strand=Plus/Plus
Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATG 63274
|| || ||||| || ||||||||| |||| || || || ||| || || | | |
Sbjct 1336761 ACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAA-AGGTCACGAGCACGGAC 1336819
Query 63275 TTCCTCGTTTCCTGTATTCTTTTT-AAGATCGAGGAACGCCATA-ATATCAGAATGCCAC 63332
||| || || || |||||| | ||| || | || | || | | ||| | ||||||
Sbjct 1336820 TTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAA--AAAGTCAAAGACATCTGCATGCCAT 1336877
Query 63333 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63392
|| || | ||| ||||| | | || || || ||||| || ||||| || | || |
Sbjct 1336878 GGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATAACGG 1336937
Query 63393 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63452
|| ||||| || | ||||| | |||||| || | ||| || || | |||||||| |||
Sbjct 1336938 GCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCG 1336997
Query 63453 GAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCA 63510
| || || ||| | |||||||| | | ||||| |||| || || || ||
Sbjct 1336998 GCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGA--GACCAATACCGCCAGCGG 1337055
Query 63511 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGA 63570
| || ||||| | || || || | |||||||||||||| || ||||| || ||
Sbjct 1337056 TCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCT 1337115
Query 63571 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63630
|||||| || || || || ||||| ||| | || ||||| ||||| || | |
Sbjct 1337116 TCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCG 1337175
Query 63631 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63690
||||||| ||||| ||||| || || | ||| | || ||||| ||||| || || |
Sbjct 1337176 TAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGC--CTT 1337233
Query 63691 CTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63748
|| | ||| | |||||| || || | |||||||| | |||||| || |||| |||
Sbjct 1337234 CTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTC 1337293
Query 63749 AACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63807
| | | |||| ||| || || | ||| || ||| |||||| || || || ||||| |
Sbjct 1337294 AGC-AACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAAGT 1337352
Query 63808 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 63867
| | ||| |||||||| || || | ||| |||||||||| | ||| | ||
Sbjct 1337353 ATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATCGGCGTGCTTCA 1337412
Query 63868 TAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 63925
| || | | | | || | ||| || || || ||||| | || ||| || || ||
Sbjct 1337413 TGAC-ACACTCGT-ATGTTTCTTTCGATATCATAGGAGACGGCTTTTGATTCTTGGGGTT 1337470
Query 63926 AACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 63985
||||||| | | | ||| || ||| || |||| || || | ||||| ||
Sbjct 1337471 GACATAGTGGTAGAGATCTGACACCACGGATGAGAACTGTTTCTTGGTCTGTTTGTGGAG 1337530
Query 63986 ATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031
|| || || || || | || ||||| |||||||| || ||||||
Sbjct 1337531 GTTGGAGACAGCAATCCGCGCTGCTAGGATGGCATAGTCGGGATGT 1337576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946086481880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |