Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq2 192 7e-44 >seq2 Length=4294494 Score = 192 bits (212), Expect = 7e-44 Identities = 548/826 (66%), Gaps = 20/826 (2%) Strand=Plus/Plus Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATG 63274 || || ||||| || ||||||||| |||| || || || ||| || || | | | Sbjct 1336761 ACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAA-AGGTCACGAGCACGGAC 1336819 Query 63275 TTCCTCGTTTCCTGTATTCTTTTT-AAGATCGAGGAACGCCATA-ATATCAGAATGCCAC 63332 ||| || || || |||||| | ||| || | || | || | | ||| | |||||| Sbjct 1336820 TTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAA--AAAGTCAAAGACATCTGCATGCCAT 1336877 Query 63333 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63392 || || | ||| ||||| | | || || || ||||| || ||||| || | || | Sbjct 1336878 GGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATAACGG 1336937 Query 63393 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63452 || ||||| || | ||||| | |||||| || | ||| || || | |||||||| ||| Sbjct 1336938 GCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCG 1336997 Query 63453 GAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCA 63510 | || || ||| | |||||||| | | ||||| |||| || || || || Sbjct 1336998 GCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGA--GACCAATACCGCCAGCGG 1337055 Query 63511 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGA 63570 | || ||||| | || || || | |||||||||||||| || ||||| || || Sbjct 1337056 TCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCT 1337115 Query 63571 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63630 |||||| || || || || ||||| ||| | || ||||| ||||| || | | Sbjct 1337116 TCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCG 1337175 Query 63631 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63690 ||||||| ||||| ||||| || || | ||| | || ||||| ||||| || || | Sbjct 1337176 TAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGC--CTT 1337233 Query 63691 CTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63748 || | ||| | |||||| || || | |||||||| | |||||| || |||| ||| Sbjct 1337234 CTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTC 1337293 Query 63749 AACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63807 | | | |||| ||| || || | ||| || ||| |||||| || || || ||||| | Sbjct 1337294 AGC-AACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAAGT 1337352 Query 63808 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 63867 | | ||| |||||||| || || | ||| |||||||||| | ||| | || Sbjct 1337353 ATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATCGGCGTGCTTCA 1337412 Query 63868 TAACTATATCCATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 63925 | || | | | | || | ||| || || || ||||| | || ||| || || || Sbjct 1337413 TGAC-ACACTCGT-ATGTTTCTTTCGATATCATAGGAGACGGCTTTTGATTCTTGGGGTT 1337470 Query 63926 AACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAG 63985 ||||||| | | | ||| || ||| || |||| || || | ||||| || Sbjct 1337471 GACATAGTGGTAGAGATCTGACACCACGGATGAGAACTGTTTCTTGGTCTGTTTGTGGAG 1337530 Query 63986 ATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64031 || || || || || | || ||||| |||||||| || |||||| Sbjct 1337531 GTTGGAGACAGCAATCCGCGCTGCTAGGATGGCATAGTCGGGATGT 1337576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946086481880