Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 1e-21
seq2 109 5e-19
seq3 96.9 3e-15
seq1 95.1 1e-14
>seq4
Length=3720747
Score = 118 bits (130), Expect = 1e-21
Identities = 109/138 (79%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | ||| | |||||||||||| || |||||||| |||
Sbjct 362412 CCACCACGCAGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 362471
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| |||||||| || ||| |||| | ||| |||||||| || |||
Sbjct 362472 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGG 362531
Query 131128 ATTCCTTCTTTGTCGGTG 131145
|||||||| ||||| |||
Sbjct 362532 ATTCCTTCCTTGTCTGTG 362549
>seq2
Length=4294494
Score = 109 bits (120), Expect = 5e-19
Identities = 287/436 (66%), Gaps = 4/436 (1%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|||||||| || || || || ||||| ||||| || |||| | ||| || ||| | ||
Sbjct 1335870 TTGACGACTTGGAATTCACCAGCCAATACACGTCGAGAATAGATGTTGGATGTGTATGGC 1335929
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
||||| | ||||| || |||| ||| || | |||| ||| || ||||| || ||
Sbjct 1335930 TCAAAGCATTCGTTGTTACCCAAGATCTGGGAAGTCGATGCAGTAGGCATAGGAGCGACA 1335989
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | |||||||| || ||| | || || | |||| |||||
Sbjct 1335990 AGAAGGGAGTTGCGGATACCGTGCTTAGCAATTTCTGCTTTCAGGCCATCCCAGTCCCAG 1336049
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| || || | || | ||||||||| || || | ||||||| | | ||||||
Sbjct 1336050 AGGTCAGAAGGAGTGACATTCCACATGTCATATTGAAGGATGCCCTGTGAGACTGGGCTG 1336109
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355
|| | | ||| ||| |||| ||| ||||||||||||||| || || |
Sbjct 1336110 CCCTCATAGGTTTCATAAGTGCCTT--GTTCCTTGGCGAGCTCGCAAGATGCTGTCAATG 1336167
Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415
|| || || || ||||| || || |||||||| | | ||||| |||
Sbjct 1336168 CGGCGTGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGTCTGGCTTCTGGAGAGTCGA 1336227
Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475
| |||| || || | ||||||||||| || || || | || | |||| || |
Sbjct 1336228 AAGGCAGACGTAGTGCCAGGAAAGCATCGGCAAGACCTTGGACACCAAGACCGACAGGTC 1336287
Query 145476 GATGTTTCATGTTGCT 145491
||||| ||||||||||
Sbjct 1336288 GATGTCTCATGTTGCT 1336303
Score = 84.2 bits (92), Expect = 2e-11
Identities = 203/303 (67%), Gaps = 6/303 (2%)
Strand=Plus/Plus
Query 146209 GCAATGAACATTCACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAG 146268
||| ||| |||| | || | |||||| || |||||| || || ||| |||
Sbjct 1337024 GCAGTGAGCATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCACAGGTCTTGAG 1337083
Query 146269 CGTCTCGTAGATGCCGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCAC 146326
|| || ||||| || |||||||| || |||| ||| | | | ||||| || ||
Sbjct 1337084 TGTGTCATAGATACCTTCAATGCTGTCCTCCTTC--ATGTCAATTAAGAAGCATGAAGAC 1337141
Query 146327 ATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA-CATTTT 146385
| || | | ||||| || || ||||| ||| || ||||| ||||| || ||
Sbjct 1337142 AATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACTTC 1337201
Query 146386 TCGGCTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAA 146445
| | ||| | || || ||||| || | | || ||| ||||||||||| || |
Sbjct 1337202 TGAGA-CATGAGGTTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGAATACCGAC 1337260
Query 146446 AGCGACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCACTTGATTGTCAATCTTTAACAA 146505
|| || ||||| ||||||||||| || || || || ||||| ||| | ||||| | |||
Sbjct 1337261 AGACACACGCATCAGCATGTGTTGTGGTCGTTCAGCAACTTGCTTGCCGATCTTGAGCAA 1337320
Query 146506 ATA 146508
|||
Sbjct 1337321 ATA 1337323
>seq3
Length=4123400
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||||||||||||||| ||||| | || || ||||| || ||||| || || |||
Sbjct 1163296 CCTTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGA 1163237
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || || |||||||| || ||||||||||| ||||| ||| || ||||| | |
Sbjct 1163236 TCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 1163177
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| ||||| | |||| ||| | ||| || || || || || || ||||
Sbjct 1163176 CGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 1163117
Query 131225 A 131225
|
Sbjct 1163116 A 1163116
>seq1
Length=4470873
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || || | ||| || | ||| | || || ||||| || |||||||||||
Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||| ||||| |||||||||||| |||| || || ||||| ||||| |||
Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| ||||| ||| | | || | || || | ||| ||||
Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACT 3798125
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||||| || || || || || || || || |||||
Sbjct 3798124 TCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 131044 TCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAG 131103
|||||||| |||||||| || || || || ||||| | |||||||||||| ||
Sbjct 3798496 TCCTTTTGGATGTTGTAGTCAGACAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAG 3798437
Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163
|| || ||||| ||||| || || || || || ||||| |||||| ||||| |
Sbjct 3798436 ATCAATCGCTGTTGGTCAGGTGGAATACCCTCCTTGTCTTGGATTTTGCTCTTGACGTTG 3798377
Query 131164 TCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223
|| | ||| || | ||||| | || | ||||| || || || || | ||| || |||
Sbjct 3798376 TCGATAGTGTCCGACGACTCAACTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACG 3798317
Query 131224 AAAATCTGCAT 131234
|| ||||||||
Sbjct 3798316 AAGATCTGCAT 3798306
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||| || || | || | ||| ||||| || ||||||||||| ||
Sbjct 3798076 CCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAA 3798017
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || |||| || |||||||| |||| || || |||||||| |||||
Sbjct 3798016 AGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGA 3797957
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | ||||| | || || |
Sbjct 3797956 ATGCCCTCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACC 3797897
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| || || || |||||||| |||||
Sbjct 3797896 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472011956277120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |