Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=4470873 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || || |||| ||||| ||| |||||||| ||||||||||| | | Sbjct 3798532 CCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGAC 3798473 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | |||||||| || ||||| ||| | || | ||||||||||| || Sbjct 3798472 AGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGA 3798413 Query 16829 ACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||| ||||| | | |||||| ||| || | | | | |||||| | ||| Sbjct 3798412 ATACCCTCCTTGTCTTGGATTTTGCT-CTTGACGTTGTCGATAGTGTCCGACGACTCAAC 3798354 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||| || || ||||| |||| || ||||| || |||||||| Sbjct 3798353 TTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || ||||||| ||||| || | ||| || ||||| ||||| || |||||||| || | Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| |||| || | ||| ||||| || | || | || || || ||| || Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185 Query 16829 ACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||||||||| | | |||||| |||||| | | | | ||||| || || Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCT-CTTCACATTGTCAATGGTGTCAGAGGATTCGAC 3798126 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||| ||||| || || || || |||||||| || ||||| Sbjct 3798125 TTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||| || || ||||||||||| | | || | | || || |||||| Sbjct 3798052 TGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCTAATTGT 3797993 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851 ||||| ||| | || | || || ||||| ||| | |||||| ||||| ||| ||| Sbjct 3797992 TTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTG 3797933 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 || ||| || | | | | || || | || || | ||||||||| || ||||| Sbjct 3797932 CT-CTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGT 3797874 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 ||| || ||||| ||||| ||||| Sbjct 3797873 CAGGGTCTTGACGAAAATTTGCAT 3797850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087294007570