Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 8e-16
>seq1
Length=4470873
Score = 98.7 bits (108), Expect = 8e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || || || || |||| ||||| ||| |||||||| ||||||||||| | |
Sbjct 3798532 CCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGAC 3798473
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | |||||||| || ||||| ||| | || | ||||||||||| ||
Sbjct 3798472 AGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGA 3798413
Query 16829 ACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||||| ||||| | | |||||| ||| || | | | | |||||| | |||
Sbjct 3798412 ATACCCTCCTTGTCTTGGATTTTGCT-CTTGACGTTGTCGATAGTGTCCGACGACTCAAC 3798354
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||| | ||| || || ||||| |||| || ||||| || ||||||||
Sbjct 3798353 TTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||||| ||||| || | ||| || ||||| ||||| || |||||||| || |
Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| |||| || | ||| ||||| || | || | || || || ||| ||
Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185
Query 16829 ACGCCCTCTTTGTC-GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||||||||||| | | |||||| |||||| | | | | ||||| || ||
Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCT-CTTCACATTGTCAATGGTGTCAGAGGATTCGAC 3798126
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||||| ||||| || || || || |||||||| || |||||
Sbjct 3798125 TTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || |||||||| || || ||||||||||| | | || | | || || ||||||
Sbjct 3798052 TGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCTAATTGT 3797993
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851
||||| ||| | || | || || ||||| ||| | |||||| ||||| ||| |||
Sbjct 3797992 TTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTG 3797933
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
|| ||| || | | | | || || | || || | ||||||||| || |||||
Sbjct 3797932 CT-CTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGT 3797874
Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935
||| || ||||| ||||| |||||
Sbjct 3797873 CAGGGTCTTGACGAAAATTTGCAT 3797850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087294007570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |