Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 205 1e-47 >seq2 Length=4294494 Score = 205 bits (226), Expect = 1e-47 Identities = 552/826 (67%), Gaps = 20/826 (2%) Strand=Plus/Plus Query 63071 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATG 63129 || || ||||| || ||||||||| |||| || || || ||| || || | | | Sbjct 1336761 ACACGCTTCATGAAAAGATCAGGAGTCCACAGCGCGTAGAAA-AGGTCACGAGCACGGAC 1336819 Query 63130 TTCCTCGTTTCCTGTATTCTTTTT-AAGATCGAGGAACGCCATA-ATATCAGAATGCCAC 63187 ||| || || || |||||| | ||| || | || | || | | ||| | |||||| Sbjct 1336820 TTCTTCTTTGCCGTGGTTCTTTCTCAAGTTCAA--AAAGTCAAAGACATCTGCATGCCAT 1336877 Query 63188 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63247 || || | ||| ||||| | | || || || ||||| || ||||| || | || | Sbjct 1336878 GGCTCGAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGACATAACGG 1336937 Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307 || ||||| || | ||||| | |||||| || | ||||||||| || |||||||| || Sbjct 1336938 GCAGTGTTGTTGAAGACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCG 1336997 Query 63308 GAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCA 63365 | || || ||| | |||||||| | | ||||| |||| || || || || Sbjct 1336998 GCAATGTATGAGCCAGTAGCACGAATGCAGTGAGCATTGA--GACCAATACCGCCAGCGG 1337055 Query 63366 TTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCA 63425 | || ||||| | || || || | || |||||||| || || || || || ||| Sbjct 1337056 TCTTGGAGATCATAGCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCT 1337115 Query 63426 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGG 63485 |||||| || || || || ||||| ||| | || ||||| ||||| || | | Sbjct 1337116 TCATGTCAATTAAGAAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCG 1337175 Query 63486 TAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63545 ||||||| ||||||||||| || || | ||| | || ||||| ||||| || || | Sbjct 1337176 TAGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTAAGTCTCGATGGC--CTT 1337233 Query 63546 CTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC 63603 || | ||| | |||||| || || | |||||||| | |||||| || |||| ||| Sbjct 1337234 CTCAACGTCATCGCCATGAATACCGACAGACACACGCATCAGCATGTGTTGTGGTCGTTC 1337293 Query 63604 AACGATCTTG-TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 63662 | | | |||| ||| || || | ||| || ||| |||||| || || || ||||| | Sbjct 1337294 AGC-AACTTGCTTGCCGATCTTGAGCAAATATGATCGTTCCAACGTCTTGAAGCCAAAGT 1337352 Query 63663 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGT 63722 | | ||| |||||||| || || | ||| |||||||||| | ||| | || Sbjct 1337353 ATTGGTAGTTGAAGTCTCGGTCATATACAATGGCCGAGTTGAGCTCATCGGCGTGCTTCA 1337412 Query 63723 TAACTACA-TC-CATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATT 63780 | || ||| || ||| | | | || || |||||| | | || ||| || || || Sbjct 1337413 TGAC-ACACTCGTATGTTTCT-TTCGATATCATAGGAGACGGCTTTTGATTCTTGGGGTT 1337470 Query 63781 GACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAG 63840 |||||||| | | | ||| || ||| || |||| || || | |||||| || Sbjct 1337471 GACATAGTGGTAGAGATCTGACACCACGGATGAGAACTGTTTCTTGGTCTGTTTGTGGAG 1337530 Query 63841 ATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 || || || || || | || ||||| |||||||| || |||||| Sbjct 1337531 GTTGGAGACAGCAATCCGCGCTGCTAGGATGGCATAGTCGGGATGT 1337576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630867382800