Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 132 4e-26 seq3 100 2e-16 >seq1 Length=4470873 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || | || || | ||||| |||||||| Sbjct 3798306 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATTACCCTTGAAGTTGAGTCGTCG 3798365 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| |||||| ||||| || || ||||||||||||||| Sbjct 3798366 GACACTATCGACAACGTCAAGAGCAAAATCCAAGACAAGGAGGGTATTCCACCTGACCAA 3798425 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| || || || |||| || || || || ||||| Sbjct 3798426 CAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGGACGCTGTCTGACTACAAC 3798485 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || ||||| ||| ||| || || || |||||||| || Sbjct 3798486 ATCCAAAAGGAAAGCACTCTGCACTTGGTGCTAAGACT 3798523 Score = 125 bits (138), Expect = 6e-24 Identities = 152/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| ||||||| || ||||||| |||| || || |||||| Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| || || ||| || || ||||| || || ||||| || |||| Sbjct 3797910 GATACCATCGA--CAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACC 3797967 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || || | || ||||| ||||||||||||||||||| |||||| | || |||| Sbjct 3797968 AGCAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACA 3798027 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | ||||| ||||| ||||| || || Sbjct 3798028 ACATTCAGAAAGAGTCCACCCTTCA 3798052 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAA 25082 ||||| || ||||||| | || || || || ||| || ||||| | ||| Sbjct 3797646 ACCGGAAAGACCATCACTCTTGAGGTCGAATCCAGTGATACGATCGACAACGTCAAGTCC 3797705 Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 || ||| ||||| ||||| ||||| ||||| || ||||| |||| || || || || Sbjct 3797706 AAGATCCAGGACAAGGAAGGAATTCCTCCTGATCAGCAGCGTCTTATCTTCGCAGGAAAG 3797765 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202 ||| | ||||||| ||||| || |||| |||||||| ||||||||||| || || ||| Sbjct 3797766 CAACTTGAAGATGGCCGCACCCTGAGCGACTACAATATCCAAAAAGAATCAACCCTCCAT 3797825 Query 25203 TTAGTGCT 25210 | || || Sbjct 3797826 CTTGTCCT 3797833 >seq3 Length=4123400 Score = 100 bits (110), Expect = 2e-16 Identities = 132/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || || || ||||||| |||| |||||||| || ||||| ||| Sbjct 1163116 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATC 1163175 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||| ||||| || ||||||||||| || || Sbjct 1163176 GA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGAT 1163233 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || |||||||| || ||| | || |||| || ||| | |||| ||||| ||||||| Sbjct 1163234 TGATCTTTGCCGGAAAGCAACTCGAGGATGGCCGAACTCTTAGCGACTACAACATTCAAA 1163293 Query 25186 A 25186 | Sbjct 1163294 A 1163294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327244790545