Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
seq3 84.2 2e-11
>seq1
Length=4470873
Score = 136 bits (150), Expect = 3e-27
Identities = 149/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | ||||| || || |||| || || || ||| | |
Sbjct 3797850 ATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAATCGTCT 3797909
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || | || || ||||| ||||||||||| ||||| ||||| ||
Sbjct 3797910 GATACCATCGACAATGTAAAGAGCAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 3797969
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || ||||| |||||||| ||||| ||| |||||| | || || ||||||
Sbjct 3797970 CAACGCTTGATCTTTGCAGGCAAACAATTAGAAGATGGCCGCACTCTTTCAGACTACAAC 3798029
Query 22399 ATTCAAAAAGAATCCACC 22416
||||| ||||| ||||||
Sbjct 3798030 ATTCAGAAAGAGTCCACC 3798047
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || ||||| |||| || ||||| ||| || |
Sbjct 3798078 ATGCAAATCTTTGTCAAGACCCTTACGGGCAAAACTATCACACTGGAAGTCGAATCCTCT 3798137
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || |||||||||||||| |||||||| || || |||||
Sbjct 3798138 GACACCATTGACAATGTGAAGAGCAAAATTCAAGACAAAGAGGGTATCCCCCCGGATCAG 3798197
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || || || ||||| || |||| || || || |||| |||||||||
Sbjct 3798198 CAACGATTGATCTTCGCAGGCAAGCAACTAGAAGACGGTCGAACTCTCTCAGATTACAAC 3798257
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || |||||||| | ||| | || || |||| || || |||
Sbjct 3798258 ATCCAGAAGGAATCCACTCTTCATCTCGTCCTGAGATTACGAGGTGGT 3798305
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || ||||| || || || || | || |||||||| || | |
Sbjct 3798306 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACAATTACCCTTGAAGTTGAGTCGTCG 3798365
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| ||||| ||||||||||||||||||||||| || |||
Sbjct 3798366 GACACTATCGACAACGTCAAGAGCAAAATCCAAGACAAGGAGGGTATTCCACCTGACCAA 3798425
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||| ||||| ||||| |||||| ||| || | || || ||||||
Sbjct 3798426 CAGCGATTGATCTTTGCAGGCAAGCAGTTGGAGGATGGCCGGACGCTGTCTGACTACAAC 3798485
Query 22399 ATTCAAAAAGAA 22410
|| ||||| |||
Sbjct 3798486 ATCCAAAAGGAA 3798497
Score = 104 bits (114), Expect = 2e-17
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||||||||| || ||| ||| ||||| | ||| | ||||
Sbjct 3797646 ACCGGAAAGACCATCACTCTTGAGGTCGAATCCAGTGATACGATCGACAACGTCAAGTCC 3797705
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||| || ||||| || ||||| || |||||||| || || || ||
Sbjct 3797706 AAGATCCAGGACAAGGAAGGAATTCCTCCTGATCAGCAGCGTCTTATCTTCGCAGGAAAG 3797765
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422
|| | || ||| ||||||| | ||| ||||| || ||||||||||| ||| | |||
Sbjct 3797766 CAACTTGAAGATGGCCGCACCCTGAGCGACTACAATATCCAAAAAGAATCAACCCTCCAT 3797825
>seq3
Length=4123400
Score = 84.2 bits (92), Expect = 2e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || ||||| | |||| ||| | ||| || ||||
Sbjct 1163131 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCC 1163190
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || ||||||||||| || || ||||| || || ||||| | || |||||||| ||
Sbjct 1163191 AAGATCCAAGACAAGGAAGGAATCCCACCTGACCAGCAACGATTGATCTTTGCCGGAAAG 1163250
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| | |||||| ||| || | ||| ||||||||||||||
Sbjct 1163251 CAACTCGAGGATGGCCGAACTCTTAGCGACTACAACATTCAAAA 1163294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727268492795
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |