Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq5 100 6e-16
seq3 91.5 3e-13
>seq5
Length=3385568
Score = 100 bits (110), Expect = 6e-16
Identities = 165/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || || ||||| || ||||||||||||||| |||| | | | ||||| || ||
Sbjct 525594 GTCGGCTCACTGTCTGGCGGTTGGAAGATGAAGTTGGCTTTGGCCAGAGCCATGCTCATG 525653
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
| |||||||| || ||||||||||| || ||||| || | ||| | |||||||
Sbjct 525654 AGAGCCGATGTTCTCCTGCTTGATGAACCTACCAATCATCTCGACGTCGCCAACGTCAAG 525713
Query 279816 TGGCT---AGTGT-CCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCA 279871
||||| || || || | || || |||| ||| | |||| | || || |||||
Sbjct 525714 TGGCTTGAAGAGTATCTGCAAAAACATTCTG-AGA---TCACTTCATTGATCGTGTCTCA 525769
Query 279872 CGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAA 279925
|||||| || || || |||||||| || | | ||| |||| || ||||| ||
Sbjct 525770 CGACTCCGGATTTCTGGATGCCGTCTGTACCGACATTCTTCATTACGAGCAGAA 525823
>seq3
Length=4123400
Score = 91.5 bits (100), Expect = 3e-13
Identities = 134/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
|||||||||| || || ||||| ||||| || || ||||| |||| | | ||
Sbjct 3285277 CTCACTCTCGTATGCGTGGTCTCTCTGGTGGTCAACGTGTCAAGGTTGTGCTTGCTGCTT 3285336
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|| | ||||||| |||||| ||||||| ||||||||||||||||||||||| |||||
Sbjct 3285337 GCACC-TGGCAACGACCTCACTTGATCGTCCTCGACGAGCCTACCAACTATCTCGACCGT 3285395
Query 280821 GAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATT 280880
|| ||| || || || ||||| | || || | || || || || |||||
Sbjct 3285396 GACTCCCTCGGTGCCTTGTCCAAGGCTCTCAAGACCTTCGAAGGTGGTGTTGTCATCATT 3285455
Query 280881 TCTCACA 280887
|||||||
Sbjct 3285456 TCTCACA 3285462
Score = 84.2 bits (92), Expect = 4e-11
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG-C 279760
|| || || ||||| |||||||||||| ||||||| |||| ||| | | | | | |
Sbjct 3284235 TCGCTCTCTGGTGGCTGGAAGATGAAGTTGGCCCTGGCTCGTGCC-GTGTTCGAAGAGCC 3284293
Query 279761 CGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCT 279820
|||| | || |||||||| ||||| ||||||||| ||||| || ||||| ||||||||
Sbjct 3284294 CGATATTCTTCTGCTTGACGAGCCCACCAACCACTTGGACGTCAAGAACGTTGCCTGGCT 3284353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834916810263
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |