Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 2e-34
seq3 138 2e-27
seq4 100 5e-16
seq2 91.5 3e-13
>seq1
Length=4470873
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | || | ||| || ||||||||||| || ||||| || || ||
Sbjct 3798076 CCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAA 3798017
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||||||||| || || || || || || | | ||| |||||||| |||
Sbjct 3798016 AGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGA 3797957
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| ||| || |||||||| || | ||||| ||
Sbjct 3797956 ATGCCCTCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACC 3797897
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || || |||||||||||||| || |||||
Sbjct 3797896 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 158 bits (174), Expect = 2e-33
Identities = 178/236 (75%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
|||| | || || ||||| | | |||||||| || ||| || ||||||||||| |
Sbjct 3798540 TTTACTGACCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGT 3798481
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| || || || |||| ||||| || |||||||| || || || || | || |||||||
Sbjct 3798480 AGTCAGACAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGT 3798421
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGC-CTTGACGGCCTCGATGGTGTCTGCT 68405
| |||||||| || ||||||||||| || ||||| ||||||| ||||| ||||| |
Sbjct 3798420 CAGGTGGAATACCCTCCTTGTCTTGGAT-TTTGCTCTTGACGTTGTCGATAGTGTCCGAC 3798362
Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || ||||| | ||| || || ||||| || | ||||||||||| ||||||||
Sbjct 3798361 GACTCAACTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 145 bits (160), Expect = 1e-29
Identities = 156/204 (76%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || ||||| || || |||||||| ||||| ||||| || | || ||||||| |||
Sbjct 3798280 TGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACCGTCTTCTAGTTGC 3798221
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || ||||| || | || ||| || || || || || || || ||||||||||| |||
Sbjct 3798220 TTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTTGTCTTGAAT-TTT 3798162
Query 68379 GC-CTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
|| ||| || || |||||||| | ||||| ||||||| ||||| ||||| |||||
Sbjct 3798161 GCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGATAGTTTTGCCCGT 3798102
Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461
||||||||||| || || |||||
Sbjct 3798101 AAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 107 bits (118), Expect = 4e-18
Identities = 136/186 (73%), Gaps = 1/186 (1%)
Strand=Plus/Minus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || || || ||||||||||| || || ||| || || | |||||||| |
Sbjct 3797829 CAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCTTCAA 3797770
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||| || ||||| || || | || || || || ||||| ||||||||||| || |
Sbjct 3797769 GTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGA 3797710
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | ||||||| ||||| || || ||||| || || | |||||||| ||||
Sbjct 3797709 TCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTCTTTC 3797650
Query 68434 CCGTGA 68439
| ||||
Sbjct 3797649 CGGTGA 3797644
>seq3
Length=4123400
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||| ||||| || ||| || || | ||||| || | ||||| ||||| || ||
Sbjct 1163294 TTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATC 1163235
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || ||| ||||| ||||| || |||||||||||||| ||||| | |||||| |||
Sbjct 1163234 AATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 1163175
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||||||||||||||||||
Sbjct 1163174 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1163116
>seq4
Length=3720747
Score = 100 bits (110), Expect = 5e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| || | || || || ||||| || |||||||| || ||||||
Sbjct 362412 CCACCACGCAGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 362471
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || || | ||| |||||||| ||
Sbjct 362472 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGG 362531
Query 68355 ATGCCTTCCTTGTCT 68369
|| ||||||||||||
Sbjct 362532 ATTCCTTCCTTGTCT 362546
>seq2
Length=4294494
Score = 91.5 bits (100), Expect = 3e-13
Identities = 231/349 (66%), Gaps = 2/349 (1%)
Strand=Plus/Minus
Query 176180 GTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAATATCCCGGGTGTTGGGGGACAGTTG 176239
|||| | || || ||||||| |||| |||||| | | || || | || || ||| |
Sbjct 3202227 GTAGGTGAGAAGCGGCTCGTCAGCCTGGTGGAACAGCTTCCTGGCGAATGGAGAGAGTCG 3202168
Query 176240 TGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGGGAACCGAATTG 176299
||||||||||| | ||| |||| || ||||| || || || | ||||| ||
Sbjct 3202167 GGTGAAGATATAACGAGCGCTGGCACAATCGTTGCCGCCCTGGTTTCGCGTGCCGAACTG 3202108
Query 176300 TCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGGGCCATTCCGAC 176359
||| ||||| || | |||| ||| || || |||||| | | || |||| |||||
Sbjct 3202107 GCCGGAAGGAACCAGTAGGTTGACGTTGTTGGATCCCACGAAATTCTGTGCCAGACCGAC 3202048
Query 176360 TATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGAT-AGCCGGCGTTCTCACTTGTGTATC 176418
|||| ||| || || | ||||||||||| | ||| | | | | |||| |
Sbjct 3202047 GATGGTTTGCTGTAGGGAAGTGTCGCCGTGGTGGTAAGCAGTCATAC-CACTGACGAGAG 3201989
Query 176419 CGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGTTGCGCTTCAACGCCGAGAACAGAA 176478
||||| || ||||| || || || | | || || || || || | | ||| |
Sbjct 3201988 AGGCAAGCTCGGCGACCTTCATATCCTTTTTCAGATTTCGTTTAAAACATGCGTACATGA 3201929
Query 176479 TCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACGGAATGGAACG 176527
||| ||||| ||||| ||||||||||| || || || ||||| ||
Sbjct 3201928 CCTTTCGCTGACCAGGCTTTAGACCATCGACAACAGAAGGGATGGATCG 3201880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921620752599960
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