Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq2 118 2e-21 seq7 98.7 2e-15 >seq2 Length=4294494 Score = 118 bits (130), Expect = 2e-21 Identities = 724/1146 (63%), Gaps = 28/1146 (2%) Strand=Plus/Plus Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 |||||||||| | || || | |||| ||| ||||||||||| ||||| || | Sbjct 1336070 CCACATGTCATATTGAAGGATGCCCTGTGAGACTGGGCTGCCCTCATAGGTTTCATAAGT 1336129 Query 244360 ACCGTCGCGCTGGGCCAGCTTACA-GCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGA 244418 || | || ||| |||| || | | ||| | | |||||| |||||||||||| | Sbjct 1336130 GCCTTGTTCCTTGGCGAGCTCGCAAGATGCTGTCAATG-CGGCGTGGTAGATGGTCTCAA 1336188 Query 244419 AGATCATCTTGTTCATGTCGCGGGCCT-TGCCGCAGGTGAAGGGGATGCCCATCATCATG 244477 ||||| |||| | | | ||| | || | || ||| || | | | || | Sbjct 1336189 AGATCTGGATGTTGAGCTGTCTGGCTTCTGGAG-AGTCGAAAGGCAGACGTAGTGCCAGG 1336247 Query 244478 AAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGC 244537 || | ||||| || || || || || | |||| |||| |||| | ||||| | | Sbjct 1336248 AAAGCATCGGCAAGACCTTGGACACCAAGACCGACAGGTCGATGTCTCATGTTGCTGTTC 1336307 Query 244538 ATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATC 244597 |||| || |||||||| ||||| | ||||| | |||||| ||||| || |||| Sbjct 1336308 TTGGCCTCAACTACGGGGTAGTAGTTGACATCGATGATCTTGTTCAGGTTTCGAGTGACA 1336367 Query 244598 ATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTG 244657 | || || || || | |||||| || ||| |||| | || Sbjct 1336368 ACTTGGGTAACCTCATGGAGGCGGCCAAAGTCATATTCGCCA-----CTCGCC-----TG 1336417 Query 244658 ATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAG 244717 || || || ||| || || | | ||| || |||||||| |||||||| || | Sbjct 1336418 GTCGACA-AAGGTCGGC-AGTGCCAGGGAGGCAAGATTGCAGACAGCCACCTCATCAGGC 1336475 Query 244718 TTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTG--ATGGTGCCCAGGTGCT 244775 ||||||| ||||||||| || || | ||| || ||| || ||||||| || || Sbjct 1336476 GAAGTGTACTCGACAATCTCCGTACACAAGTT--TGAGCTTCGAATAGTGCCCAAGTTCT 1336533 Query 244776 GGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGA 244835 || ||| ||| ||||||| || |||||||| | ||| |||| || ||||| Sbjct 1336534 TCTGGTTGCTCTTCTCGTTGCATGCATCCTTGTACAAGATGTAGGGTGTGCCAGTCTCAG 1336593 Query 244836 GCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGC 244895 ||| || | |||| | ||| || | | || |||| || ||| | | Sbjct 1336594 TCTGAGCCTCAAGGATAGCATACCACAGCTTCTGGGCTTTGATGGTTTGACGACCACGTC 1336653 Query 244896 CCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGC 244955 | || |||||| || || |||||||| | || | || || | || | Sbjct 1336654 CTTCCCGCTCGTATTTCTCATAGAGAGCCTCGAATTTTTCACCATATACATCAGCAAGAC 1336713 Query 244956 CGGGGCACGACGCC-GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATG 245014 | || | | || ||||| | |||| |||| || | | || || | || |||| Sbjct 1336714 CAGG-CGCCTCGTGAGGGCAGAAGAGAGTCCAGTCCTGGTTCTTCTCAACACGCTTCATG 1336772 Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074 || || || || |||| || || | ||| ||||| | | | || || ||| Sbjct 1336773 AAAAGATCAGGAGTCCACAGCGCGTAGAAAAGGTCACGAGCACGGACTTCTTCTTTGCCG 1336832 Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134 |||||| |||| | ||||||||||||||| || | ||||| ||||| | ||||| Sbjct 1336833 TGGTTCTTTCTCAAGTTCAAAAAGTCAAAGACATCTGCATGCCATGGCTCGAGGTAGATG 1336892 Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAA 245193 |||| ||| || || ||||||||||| |||||||| | ||| || | |||||| Sbjct 1336893 GCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGA-CATAACGGGCAGTGTTGTTGAA 1336951 Query 245194 GATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC 245253 || | || | || | | || || ||| || |||||||| ||||| | ||| Sbjct 1336952 GACTCTGAGCATTGGGATGAGACCATTGGAGGTCCCATTGGTGCCGGCAATGTATGAGCC 1337011 Query 245254 CTTGCCCCTGAGG--TTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGG 245311 | | | | | || || || | || | ||||| ||| ||||||||| | Sbjct 1337012 AGTAGCACGAATGCAGTGAGCATTGAGA--CCAATACCGCCAGCGGTCTTGGAGATCATA 1337069 Query 245312 GCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGA 245371 || ||| |||||| ||||| || || || ||||||||| |||||||| | | Sbjct 1337070 GCACAGGTCTTGAGTGTGTCATAGATACCTTCAATGCTGTCCTCCTTCATGTCAATTAAG 1337129 Query 245372 AAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGG 245431 ||||| || |||| || |||| || | | | |||||||| || || |||||| Sbjct 1337130 AAGCATGAAGACAATTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGA 1337189 Query 245432 GTAAAG 245437 |||||| Sbjct 1337190 GTAAAG 1337195 >seq7 Length=2329771 Score = 98.7 bits (108), Expect = 2e-15 Identities = 172/248 (69%), Gaps = 7/248 (3%) Strand=Plus/Minus Query 42786 ATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGAC 42845 |||||||| | || ||||| || || | ||| | || ||||| |||| | ||| Sbjct 254236 ATGCCCGGCTTGACTTTCTCCAATGAGTTGATCTCTCGTGATGAGGGCATGCACACCGAC 254177 Query 42846 TTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC--CTCGAAGGAGCGGGTCC 42903 || || || || || | | ||||||| ||||||||| ||| | |||| | || Sbjct 254176 TTCGCTTGTCTGTTGATGCAG---CACCTCAAGCACAAGCCGGCTCCA--GAGCTGATCG 254122 Query 42904 GGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCG 42963 | ||||||| |||||||| ||||||||||| ||| | ||| | | ||||| | Sbjct 254121 AGAGGGTCATCACTGAGGCCGTCACCATCGAGAAGGAATTCTTGACGGATGCTCTGCCAG 254062 Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 || |||| |||| |||||| | | |||||| |||||||| | | ||||||||||| Sbjct 254061 TGGCCCTCCTCGGAATGAACGCCAAGCTCATGCAACAGTACATCGAATTCGTCGCCGACC 254002 Query 43024 ATCTCCTG 43031 ||| ||| Sbjct 254001 GTCTACTG 253994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337511993680