Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 2e-29
seq3 93.3 1e-13
>seq1
Length=4470873
Score = 145 bits (160), Expect = 2e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || ||||| | || ||||||||||||||| ||||||
Sbjct 3797848 CCACCACGGAGACGGAGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTC 3797789
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | ||| |||||||||||||| |||||||| ||| | ||
Sbjct 3797788 AGGGTGCGGCCATCTTCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGA 3797729
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || |||||||| || | || ||||| || || | ||| || ||||| ||
Sbjct 3797728 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACC 3797669
Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449
|| || ||||| ||||| |||||
Sbjct 3797668 TCAAGAGTGATGGTCTTTCCGGT 3797646
Score = 143 bits (158), Expect = 6e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || ||||| || || | || | |||||||| |||||||| || |||||
Sbjct 3798535 TGACCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCA 3798476
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| ||||| || || || || || || || ||||| ||||||| |||||||| | |
Sbjct 3798475 GACAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGT 3798416
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| || || || || || |||||||| ||| || ||||| || |||| || ||| ||
Sbjct 3798415 GGAATACCCTCCTTGTCTTGGATTTT-GCTCTTGACGTTGTCGATAGTGTCCGACGACTC 3798357
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || || ||||| || |||| |||||||||||| ||||||||
Sbjct 3798356 AACTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
Score = 129 bits (142), Expect = 1e-24
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| || |||||||||| ||| ||| || ||||| || || || | |
Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||||| ||| || ||||||||||||| || || ||| |||
Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || ||||| || || ||||| ||| ||||| || || || | || ||||| ||
Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTT-GCTCTTCACATTGTCAATGGTGTCAGAGGATTCGAC 3798126
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| || ||||| || || || || || |||||||| || || |||||
Sbjct 3798125 TTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 125 bits (138), Expect = 2e-23
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| ||||| || | || || || |||| ||| ||||| || || || ||||| |
Sbjct 3798076 CCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAA 3798017
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || |||||||||||||| ||||| ||||||| || || || ||
Sbjct 3798016 AGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGA 3797957
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || ||||| || || ||| || || || || || | ||| |||||| ||
Sbjct 3797956 ATGCCCTCCTTGTCCTGAATCTT-GCTCTTTACATTGTCGATGGTATCAGACGATTCAAC 3797898
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| ||||| |||||||| ||||||||||| || |||||
Sbjct 3797897 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
>seq3
Length=4123400
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
||||| || || |||||| || || || || || || | ||| ||||| || ||||||
Sbjct 1163294 TTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAGATC 1163235
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
| || || || | |||||||||||| || || ||||| || | || || || ||
Sbjct 1163234 AATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 1163175
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||| || || || ||||| ||||| ||||| || || || |||||||||||
Sbjct 1163174 ATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 1163116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179652238651954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |