Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq4 93.3 4e-14 seq2 89.7 5e-13 >seq1 Length=4470873 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||| | | || || || |||| || || ||||| ||||||||||| |||| Sbjct 3798077 ACCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGA 3798018 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| | || ||||| ||| | || | || |||||||||||||| Sbjct 3798017 AAGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGG 3797958 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||||||| || | |||||| | || || Sbjct 3797957 AATGCCCTCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAAC 3797898 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||||| || || |||||||||||||| Sbjct 3797897 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || ||||| || || ||||||| || ||||| || || ||||||||||||| Sbjct 3798305 ACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGA 3798246 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || ||||||| || |||||||| || | || | || ||||| || || || Sbjct 3798245 GAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGG 3798186 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || ||||| ||||| ||||| ||| ||| || | || ||| || || || Sbjct 3798185 GATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGAC 3798126 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | || ||||| || | || || || || |||||||| Sbjct 3798125 TTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||||||||| || ||||| || | |||||| | ||| Sbjct 3797833 AGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCT 3797774 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| ||||| || || | || || |||||||| || |||||||||||||| || || Sbjct 3797773 TCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCC 3797714 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | ||||||| || || || || | ||| | |||| Sbjct 3797713 TGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTC 3797654 Query 64412 TTGCCGGT 64419 || ||||| Sbjct 3797653 TTTCCGGT 3797646 >seq4 Length=3720747 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || ||||| | ||||| || || || |||||||| || | Sbjct 362411 ACCACCACGCAGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 362470 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || |||||||| ||||| | || || || ||||||||||| || Sbjct 362471 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGG 362530 Query 64336 AATTCCTTCTTTTTCT 64351 |||||||| || ||| Sbjct 362531 GATTCCTTCCTTGTCT 362546 >seq2 Length=4294494 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 155226 GTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAAC-AAGAAACACGAAGATAA 155284 || || || || |||| |||||||| || |||| ||||| ||||| || ||||| || Sbjct 1337085 GTGTCATAGATACCTTCAATGCTGTCCTCCTTCAT-GTCAATTAAGAAGCATGAAGACAA 1337143 Query 155285 TTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTT 155344 |||||| ||||| || || || | |||||| ||||| ||||| || | Sbjct 1337144 TTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACTTCTG 1337203 Query 155345 GGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGC 155404 | | | ||||||||| |||||||| |||| |||| || || ||||||| | Sbjct 1337204 AGACATGAGGTTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGAATACCGACAGA 1337263 Query 155405 CACGCGCATCAGCATGTGTTG 155425 ||| ||||||||||||||||| Sbjct 1337264 CACACGCATCAGCATGTGTTG 1337284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643906884920