Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
seq4 93.3 4e-14
seq2 89.7 5e-13
>seq1
Length=4470873
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||||||||| | | || || || |||| || || ||||| ||||||||||| ||||
Sbjct 3798077 ACCGCCGCGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGA 3798018
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| | ||||| | || ||||| ||| | || | || ||||||||||||||
Sbjct 3798017 AAGAGTGCGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGG 3797958
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||||||| || | |||||| | || ||
Sbjct 3797957 AATGCCCTCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAAC 3797898
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||||||||| || || ||||||||||||||
Sbjct 3797897 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || ||||| || || ||||||| || ||||| || || |||||||||||||
Sbjct 3798305 ACCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGA 3798246
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| || || ||||||| || |||||||| || | || | || ||||| || || ||
Sbjct 3798245 GAGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGG 3798186
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || ||||| ||||| ||||| ||| ||| || | || ||| || || ||
Sbjct 3798185 GATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGAC 3798126
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| | || | || ||||| || | || || || || ||||||||
Sbjct 3798125 TTCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 100 bits (110), Expect = 3e-16
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || ||||||||||| || ||||| || | |||||| | |||
Sbjct 3797833 AGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCT 3797774
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| ||||| || || | || || |||||||| || |||||||||||||| || ||
Sbjct 3797773 TCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCC 3797714
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||||| || || || || | ||| | ||||
Sbjct 3797713 TGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTC 3797654
Query 64412 TTGCCGGT 64419
|| |||||
Sbjct 3797653 TTTCCGGT 3797646
>seq4
Length=3720747
Score = 93.3 bits (102), Expect = 4e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || ||||| | ||||| || || || |||||||| || |
Sbjct 362411 ACCACCACGCAGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 362470
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| |||| || |||||||| ||||| | || || || ||||||||||| ||
Sbjct 362471 GAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGG 362530
Query 64336 AATTCCTTCTTTTTCT 64351
|||||||| || |||
Sbjct 362531 GATTCCTTCCTTGTCT 362546
>seq2
Length=4294494
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 155226 GTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAAC-AAGAAACACGAAGATAA 155284
|| || || || |||| |||||||| || |||| ||||| ||||| || ||||| ||
Sbjct 1337085 GTGTCATAGATACCTTCAATGCTGTCCTCCTTCAT-GTCAATTAAGAAGCATGAAGACAA 1337143
Query 155285 TTGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTT 155344
|||||| ||||| || || || | |||||| ||||| ||||| || |
Sbjct 1337144 TTGAGGCTGAGGCGTTCCAGCATTGAACAGCGTAGGAGAGGCGTGAGTAAAGCACTTCTG 1337203
Query 155345 GGCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGC 155404
| | | ||||||||| |||||||| |||| |||| || || ||||||| |
Sbjct 1337204 AGACATGAGGTTGTAAGTCTCGATGGCCTTCTCAACGTCATCGCCATGAATACCGACAGA 1337263
Query 155405 CACGCGCATCAGCATGTGTTG 155425
||| |||||||||||||||||
Sbjct 1337264 CACACGCATCAGCATGTGTTG 1337284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643906884920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |