Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 217 1e-51 >seq2 Length=4294494 Score = 217 bits (240), Expect = 1e-51 Identities = 611/932 (66%), Gaps = 22/932 (2%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT-GGATGG 93773 || ||| | ||||||| |||||| || |||| || || | |||||||| || | Sbjct 1337362 AACTACCAATACTTTGGCTTCAAGACGTTGGAACGATCATATTTGCTCAAGATCGGCAAG 1337303 Query 93774 CAGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCA 93833 || | || | || ||||| || || |||||||||| || | |||| ||||| ||| | Sbjct 1337302 CAAG-TTGCTGAACGACCACAACACATGCTGATGCGTGTGTCTGTCGGTATTCATGGCGA 1337244 Query 93834 CGACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGC 93893 ||| | ||| | | | ||| || |||| | ||| | | ||| || Sbjct 1337243 TGACGTTGAGAAGGCCATCGAGACTTACAACCTCATGTCTCAGAAGTGCTTTACTCACGC 1337184 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | | || || |||||||| || || || || ||| || ||||||| || ||| | || Sbjct 1337183 CTCTCCTACGCTGTTCAATGCTGGAACGCCTCAGCCTCAATTGTCTTCATGCTTCTTAAT 1337124 Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 ||| | |||| ||| ||| || || | |||| |||||| |||||| | | Sbjct 1337123 TGAC-ATGAAGGAGGACAGCATTGAAGGTATCTATGACACACTCAAGACCTGTGCTATGA 1337065 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || ||| || || || || ||| || ||| | | ||||| | || || | Sbjct 1337064 TCTCCAAGACCGCTGGCGGTATTGGTCTCAATGCTCACTGCATTCGTGCTACTGGCTCAT 1337005 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| ||| |||||||| |||||||| || ||| |||| |||||| | |||||||||| Sbjct 1337004 ACATTGCCGGCACCAATGGGACCTCCAATGGTCTCATCCCAATGCTCAGAGTCTTCAACA 1336945 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | || || || || ||||||||||| | | | ||| | ||||| |||| | Sbjct 1336944 ACACTGCCCGTTATGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCATCTACC 1336885 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| ||||| || || || | || | || || |||||||||||||||| | Sbjct 1336884 TCGAGCCATGGCATGCAGATGTCTTTGACTTTTTGAACTTGAGAAAGAACCACGGCAAAG 1336825 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | | || | ||||| |||||||| || ||| || || ||||| ||||| | Sbjct 1336824 AAGAAGTCCGTGCTCGTGACCTTTTCTACGCGCTGTGGACTCCTGATCTTTTCATGAAGC 1336765 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||||| ||| | ||||| ||| || || || | || || || || | | Sbjct 1336764 GTGTTGAGAAGAACCAGGACTGGACTCTCTTCTGCCCTCACGAGGCGCCTGGTCTTGCTG 1336705 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACG---AAT-CGCAGGGCAAG 94428 | || | ||| |||| | || | |||| || | ||| || || ||| Sbjct 1336704 ATGTATATGG---------TGAAAAATTCGAGGCTCTCTATGAGAAATACGAGCGGGAAG 1336654 Query 94429 GCCAGGAAGGT-----TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483 | | | || || | || |||||||||| || ||| | || | ||| Sbjct 1336653 GACGTGGTCGTCAAACCATCAAAGCCCAGAAGCTGTGGTATGCTATCCTTGAGGCTCAGA 1336594 Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGC 94543 ||||| || || ||||||||||||| |||||| | ||||| ||| ||||||| Sbjct 1336593 CTGAGACTGGCACACCCTACATCTTGTACAAGGATGCATGCAACGAGAAGAGCAACCAGA 1336534 Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 || || | || || ||||| || |||| || |||||||||||||| ||||| | Sbjct 1336533 AGAACTTGGGCACTATTCGAAGCTCAAACTTGTGTACGGAGATTGTCGAGTACACTTCGC 1336474 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCC 94635 | || ||| | ||||| || || || | |||| Sbjct 1336473 CTGATGAGGTGGCTGTCTGCAATCTTGCCTCC 1336442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722315682280