Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1 125 5e-24 >seq1 Length=4470873 Score = 125 bits (138), Expect = 5e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || ||||| || |||||||| || ||| | | | |||||||||||| Sbjct 3798052 TGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTGCGGCCATCTTCTAATTGT 3797993 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| || | ||||| || || |||||| ||||| || |||||||| ||| ||| Sbjct 3797992 TTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTG 3797933 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || |||||| | || || ||||| ||| || || | ||| ||||| || || ||| Sbjct 3797932 CTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGGGTGATGGTCTTGCCGGTC 3797873 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || || |||||||||||| Sbjct 3797872 AGGGTCTTGACGAAAATTTGCATA 3797849 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| ||||| | || | |||||| || || || || || ||||||||||| | Sbjct 3798304 CCACCTCGTAATCTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAG 3798245 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| ||| ||||||||| ||| ||||| ||| | ||||| || || || || || Sbjct 3798244 AGAGTTCGACCGTCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGG 3798185 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| ||||||||| || ||| | || || || || ||| || Sbjct 3798184 ATACCCTCTTTGTCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACT 3798125 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || || ||||| || || || || || ||||| ||||||||| Sbjct 3798124 TCCAGTGTGATAGTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCATA 3798077 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | ||||| || || || || || || ||||| |||||||| || Sbjct 3798532 CCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGAC 3798473 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || || || ||||| || | ||||| ||||||||||| |||| Sbjct 3798472 AGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGA 3798413 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| |||||||| || || | || ||||| || || || Sbjct 3798412 ATACCCTCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACT 3798353 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | |||||| || || || |||| ||| || || || || |||||| Sbjct 3798352 TCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCATA 3798305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391377132755