Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23] 143 sequences; 38,224,514 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq3 95.1 1e-14 >seq1 Length=4470873 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||| || ||||| || || |||||||| ||||| || ||||| || ||| | Sbjct 3798292 CTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACCG 3798233 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||| || |||||| | |||||||||||||| ||||| || || || ||||| Sbjct 3798232 TCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTTG 3798173 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||||||||| || | || | |||||| || || |||||||| || || | Sbjct 3798172 TCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGATA 3798113 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || || || || ||||| |||||||| Sbjct 3798112 GTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078 Score = 95.1 bits (104), Expect = 1e-14 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || |||||||| ||||| | ||||| ||||||||||| || |||||||| || || Sbjct 3798005 ATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTT 3797946 Query 45245 ATCTTGAATTTT--TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302 || ||||| || | || || | || | ||| || || || || || ||||| || Sbjct 3797945 GTCCTGAATCTTGCTCTTTACATTG--TCGATGGTATCAGACGATTCAACCTCGAGGGTG 3797888 Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || |||||||| || || || || ||||||||||| Sbjct 3797887 ATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || || | ||| | ||||| || |||||||||||| || || | | | Sbjct 3798532 CCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGT--CAG 3798475 Query 45174 ACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || | | | ||| ||||| || || ||||| | |||||||| || ||||| || | Sbjct 3798474 ACAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTG 3798415 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 |||| || || || ||||| ||||| |||| || | || | ||||| || ||||| Sbjct 3798414 GAATACCCTCCTTGTCTTGGATTTTGCTCTTGA-CGTTGTCGATAGTGTCCGACGACTCA 3798356 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| || || || || | ||| || || || || ||||| Sbjct 3798355 ACTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306 >seq3 Length=4123400 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 45145 TTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTG 45204 || || ||||||| || || || ||||| | ||| ||| || | ||| ||||| | Sbjct 1163302 TTCATACCTTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGG 1163243 Query 45205 CGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGA 45264 | | ||||||||||||||||| || || || ||||| || ||||| || || |||| Sbjct 1163242 CAAAGATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGA 1163183 Query 45265 TCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTT 45324 || | ||||||||||||||| || ||||| || | || ||||| || || || | Sbjct 1163182 CATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCT 1163123 Query 45325 TTACAAA 45331 | || || Sbjct 1163122 TGACGAA 1163116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002392044280