Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq3 95.1 1e-14
>seq1
Length=4470873
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||| || ||||| || || |||||||| ||||| || ||||| || ||| |
Sbjct 3798292 CTCAGGACGAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGAGAGAGTTCGACCG 3798233
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||| || |||||| | |||||||||||||| ||||| || || || |||||
Sbjct 3798232 TCTTCTAGTTGCTTGCCTGCGAAGATCAATCGTTGCTGATCCGGGGGGATACCCTCTTTG 3798173
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||||||||| || | || | |||||| || || |||||||| || || |
Sbjct 3798172 TCTTGAATTTTGCTCTTCACATTGTCAATGGTGTCAGAGGATTCGACTTCCAGTGTGATA 3798113
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || || || || ||||| ||||||||
Sbjct 3798112 GTTTTGCCCGTAAGGGTCTTGACAAAGATTTGCAT 3798078
Score = 95.1 bits (104), Expect = 1e-14
Identities = 117/158 (74%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || |||||||| ||||| | ||||| ||||||||||| || |||||||| || ||
Sbjct 3798005 ATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCCTT 3797946
Query 45245 ATCTTGAATTTT--TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTA 45302
|| ||||| || | || || | || | ||| || || || || || ||||| ||
Sbjct 3797945 GTCCTGAATCTTGCTCTTTACATTG--TCGATGGTATCAGACGATTCAACCTCGAGGGTG 3797888
Query 45303 ACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || |||||||| || || || || |||||||||||
Sbjct 3797887 ATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 3797850
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || || | ||| | ||||| || |||||||||||| || || | | |
Sbjct 3798532 CCACCACGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGT--CAG 3798475
Query 45174 ACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| | | | ||| ||||| || || ||||| | |||||||| || ||||| || |
Sbjct 3798474 ACAGCGTCCGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTG 3798415
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
|||| || || || ||||| ||||| |||| || | || | ||||| || |||||
Sbjct 3798414 GAATACCCTCCTTGTCTTGGATTTTGCTCTTGA-CGTTGTCGATAGTGTCCGACGACTCA 3798356
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| || || || || | ||| || || || || |||||
Sbjct 3798355 ACTTCAAGGGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3798306
>seq3
Length=4123400
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 45145 TTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTG 45204
|| || ||||||| || || || ||||| | ||| ||| || | ||| ||||| |
Sbjct 1163302 TTCATACCTTTTGAATGTTGTAGTCGCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGG 1163243
Query 45205 CGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGA 45264
| | ||||||||||||||||| || || || ||||| || ||||| || || ||||
Sbjct 1163242 CAAAGATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGA 1163183
Query 45265 TCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTT 45324
|| | ||||||||||||||| || ||||| || | || ||||| || || || |
Sbjct 1163182 CATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCT 1163123
Query 45325 TTACAAA 45331
| || ||
Sbjct 1163122 TGACGAA 1163116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002392044280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |