Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20oligosperma_20[genbank_20GCA_5F000835515.1_202015-02-23]
143 sequences; 38,224,514 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 2e-21
seq4 104 6e-17
seq3 87.8 4e-12
>seq1
Length=4470873
Score = 118 bits (130), Expect = 2e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||| ||||| || || || ||||||| |||||||| || || | ||||||
Sbjct 3797833 AGGACAAGATGGAGGGTTGATTCTTTTTGGATATTGTAGTCGCTCAGGGTGCGGCCATCT 3797774
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || |||||||| |||||||| ||||||||||| || ||| ||||||||| |||
Sbjct 3797773 TCAAGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGAGGAATTCCTTCCTTGTCC 3797714
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| || || | | ||| || || | ||||| |||
Sbjct 3797713 TGGATCTTGGACTTGACGTTGTCGATCGTATCACTGGATTCGACCTCAAGAGTGATGGTC 3797654
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 3797653 TTTCCGGTGA 3797644
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||||||||| || || ||||| || || | ||||||||| | | |||
Sbjct 3798070 CGAAGACGGAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAAAGAGTG 3798011
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| |||||||| | || || || || ||||| | || |||||||| ||| ||| ||
Sbjct 3798010 CGGCCATCTTCTAATTGTTTGCCTGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCC 3797951
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| || |||| ||| || | | ||| || || |
Sbjct 3797950 TCCTTGTCCTGAATCTTGCTCTTTACATTGTCGATGGTATCAGACGATTCAACCTCGAGG 3797891
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || || || || || ||||||||
Sbjct 3797890 GTGATGGTCTTGCCGGTCAGGGTCTTGACGAAAATTTG 3797853
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||| || || | ||| ||||| |||||||||| ||||||||||| || |||
Sbjct 3798526 CGAAGTCTTAGCACCAAGTGCAGAGTGCTTTCCTTTTGGATGTTGTAGTCAGACAGCGTC 3798467
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||| |||||| || || ||||| | ||||| ||||| || ||| ||
Sbjct 3798466 CGGCCATCCTCCAACTGCTTGCCTGCAAAGATCAATCGCTGTTGGTCAGGTGGAATACCC 3798407
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || || || ||| ||| |||| ||||| | | || || || |
Sbjct 3798406 TCCTTGTCTTGGATTTTGCTCTTGACGTTGTCGATAGTGTCCGACGACTCAACTTCAAGG 3798347
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || | ||| || || || || ||
Sbjct 3798346 GTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTG 3798309
>seq4
Length=3720747
Score = 104 bits (114), Expect = 6e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| || ||||| ||||||||||| |||| ||||||||| | | ||
Sbjct 362418 CGCAGGCGCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 362477
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||||||||||||||| ||||| |||||||| || ||||||
Sbjct 362478 CGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCGGGCGGGATTCCT 362537
Query 199529 TC 199530
||
Sbjct 362538 TC 362539
>seq3
Length=4123400
Score = 87.8 bits (96), Expect = 4e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAA-AGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498
||||||| | ||||||||| || || ||| | ||||| || || ||||||||||| |||
Sbjct 1163296 CCTTTTGAATGTTGTAGTC-GCTAAGAGTTCGGCCATCCTCGAGTTGCTTTCCGGCAAAG 1163238
Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558
|| | || |||||||| || |||||||| || || ||||| ||| ||
Sbjct 1163237 ATCAATCGTTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTG 1163178
Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618
|||| |||||| | | || || || | ||||| ||||| |||||||| || || ||
Sbjct 1163177 TCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 1163118
Query 199619 AA 199620
||
Sbjct 1163117 AA 1163116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178919439994581
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |